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Solution NMR structure of gp41 ectodomain monomer on a DPC micelle
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D HNCACB 100 mM [U-99% 2H] DPC, 50 mM sodium phosphate 93% H2O/7% D2O 0.05 4.0 ambient 310 2 3D HNCO 100 mM [U-99% 2H] DPC, 50 mM sodium phosphate 93% H2O/7% D2O 0.05 4.0 ambient 310 3 3D 1H-15N NOESY 100 mM [U-99% 2H] DPC, 50 mM sodium phosphate 93% H2O/7% D2O 0.05 4.0 ambient 310 4 3D HCCH-TOCSY 100 mM [U-99% 2H] DPC, 50 mM sodium phosphate 93% H2O/7% D2O 0.05 4.0 ambient 310 5 2D 1H-1H NOESY 100 mM [U-99% 2H] DPC, 50 mM sodium phosphate 93% H2O/7% D2O 0.05 4.0 ambient 310 6 2D 1H-15N Artsy 100 mM [U-99% 2H] DPC, 50 mM potassium phosphate 93% H2O/7% D2O 0.05 4.0 ambient 310 7 2D 1H-15N Trosy-HSQC 100 mM [U-99% 2H] DPC, 50 mM potassium phosphate 93% H2O/7% D2O 0.05 4.0 ambient 310 8 3D HNCO 100 mM [U-99% 2H] DPC, 50 mM potassium phosphate 93% H2O/7% D2O 0.05 4.0 ambient 310
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 800 3 Bruker AVANCE 900 4 Bruker AVANCE 500
NMR Refinement Method Details Software simulated annealing X-PLOR NIH
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 30 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution X-PLOR NIH 2.34 Schwieters, Kuszewski, Tjandra and Clore 2 refinement X-PLOR NIH