2MIX
Structure of a novel venom peptide toxin from sample limited terebrid marine snail
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-13C HSQC aliphatic | 260 uM Tv1 | 100% D2O | 1 | 6.0 | ambient | 278 | |
2 | 2D 1H-1H NOESY | 260 uM Tv1 | 100% D2O | 1 | 6.0 | ambient | 278 | |
3 | 2D 1H-1H TOCSY | 260 uM Tv1 | 100% D2O | 1 | 6.0 | ambient | 278 | |
4 | 2D 1H-1H NOESY | 260 uM Tv1 | 90% H2O/10% D2O | 1 | 6.0 | ambient | 278 | |
5 | 2D 1H-1H TOCSY | 260 uM Tv1 | 90% H2O/10% D2O | 1 | 6.0 | ambient | 278 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Agilent | Uniform NMR System | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | ARIA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | ARIA | Linge, O'Donoghue and Nilges | |
2 | geometry optimization | TALOS | Cornilescu, Delaglio and Bax | |
3 | structure solution | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
4 | chemical shift assignment | Analysis | CCPN | |
5 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read |