SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.7-1.2 mM [U-13C; U-15N] avidin-1, 0.7-1.2 mM d-biotin-2, 93 % H2O-3, 7 % D2O-493% H2O/7% D2O6.51 atm333
22D 1H-13C HSQC0.7-1.2 mM [U-13C; U-15N] avidin-1, 0.7-1.2 mM d-biotin-2, 93 % H2O-3, 7 % D2O-493% H2O/7% D2O6.51 atm333
33D HNCACB0.7-1.2 mM [U-13C; U-15N] avidin-1, 0.7-1.2 mM d-biotin-2, 93 % H2O-3, 7 % D2O-493% H2O/7% D2O6.51 atm333
43D CBCA(CO)NH0.7-1.2 mM [U-13C; U-15N] avidin-1, 0.7-1.2 mM d-biotin-2, 93 % H2O-3, 7 % D2O-493% H2O/7% D2O6.51 atm333
53D H(CCO)NH0.7-1.2 mM [U-13C; U-15N] avidin-1, 0.7-1.2 mM d-biotin-2, 93 % H2O-3, 7 % D2O-493% H2O/7% D2O6.51 atm333
63D C(CO)NH0.7-1.2 mM [U-13C; U-15N] avidin-1, 0.7-1.2 mM d-biotin-2, 93 % H2O-3, 7 % D2O-493% H2O/7% D2O6.51 atm333
73D HCCH-COSY0.7-1.2 mM [U-13C; U-15N] avidin-1, 0.7-1.2 mM d-biotin-2, 93 % H2O-3, 7 % D2O-493% H2O/7% D2O6.51 atm333
8(HB)CB(CGCD)HD0.7-1.2 mM [U-13C; U-15N] avidin-1, 0.7-1.2 mM d-biotin-2, 93 % H2O-3, 7 % D2O-493% H2O/7% D2O6.51 atm333
9HCCmHm0.7-1.2 mM [U-13C; U-15N] avidin-1, 0.7-1.2 mM d-biotin-2, 93 % H2O-3, 7 % D2O-493% H2O/7% D2O6.51 atm333
103D 1H-13C NOESY0.7-1.2 mM [U-13C; U-15N] avidin-1, 0.7-1.2 mM d-biotin-2, 93 % H2O-3, 7 % D2O-493% H2O/7% D2O6.51 atm333
113D 1H-15N NOESY0.7-1.2 mM [U-13C; U-15N] avidin-1, 0.7-1.2 mM d-biotin-2, 93 % H2O-3, 7 % D2O-493% H2O/7% D2O6.51 atm333
123D 1H-13C NOESY0.7-1.2 mM [U-13C; U-15N] avidin-5, 0.7-1.2 mM d-biotin-6, 100 % D2O-7100% D2O6.51 atm333
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUnity INOVA800
NMR Refinement
MethodDetailsSoftware
simulated annealing, molecular dynamicsVNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number15
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMRVarian
2processingVNMRVarian
3data analysisSparkyGoddard, Guntert, Mumenthaler and Wuthrich
4structure solutionSparkyGoddard, Guntert, Mumenthaler and Wuthrich
5structure solutionX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
6refinementAmberCase, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman
7refinementX-PLOR NIH