2MDA

The Solution Structure of the Regulatory Domain of Tyrosine Hydroxylase


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.8 mM [U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
22D 1H-15N HSQC1.0-1.2 mM [U-95% 13C; U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
32D 1H-13C HSQC1.0-1.2 mM [U-95% 13C; U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
43D CBCA(CO)NH1.0-1.2 mM [U-95% 13C; U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
53D C(CO)NH1.0-1.2 mM [U-95% 13C; U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
63D HNCO1.0-1.2 mM [U-95% 13C; U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
73D HNCA1.0-1.2 mM [U-95% 13C; U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
83D HNCACB1.0-1.2 mM [U-95% 13C; U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
93D HBHA(CO)NH1.0-1.2 mM [U-95% 13C; U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
103D HN(CO)CA1.0-1.2 mM [U-95% 13C; U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
113D H(CCO)NH1.0-1.2 mM [U-95% 13C; U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
123D HCCH-TOCSY1.0-1.2 mM [U-95% 13C; U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
133D HNHA1.0-1.2 mM [U-95% 13C; U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
143D 1H-15N NOESY0.8 mM [U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
153D 1H-15N NOESY0.9 mM RDTyrH65, 0.9 mM [U-2H;U-15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
163D 1H-13C NOESY1.0-1.2 mM [U-95% 13C; U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
172D IPAP-HSQC0.8 mM [U-95% 15N] RDTyrH65, 50 mM sodium phosphate, 8 mg/mL Pf1 phage95% H2O/5% D2O0.117.0ambient300
18T10.8 mM [U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
19T20.8 mM [U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
20Relax_NOE0.8 mM [U-95% 15N] RDTyrH65, 50 mM sodium phosphate95% H2O/5% D2O0.117.0ambient300
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance700
2BrukerAvance600
3BrukerAvance500
NMR Refinement
MethodDetailsSoftware
simulated annealingARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionARIALinge, O'Donoghue and Nilges
2data analysisModelFreePalmer
3processingNMRDrawDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5chemical shift assignmentNMRViewJohnson, One Moon Scientific
6peak pickingNMRViewJohnson, One Moon Scientific
7data analysisNMRViewJohnson, One Moon Scientific
8chemical shift calculationPECANEghbalnia, Wang, Bahrami, Assadi, and Markley
9refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read
10data analysisProcheckNMRLaskowski and MacArthur
11data analysisTALOSCornilescu, Delaglio and Bax
12collectionTOPSPINBruker Biospin