☰ Navigation Tabs
Solution structure of ShK-like immunomodulatory peptide from Ancylostoma caninum (hookworm)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1 mM [U-100% 13C; U-100% 15N] entity, 10 mM sodium phosphate 90% H2O/10% D2O 5.4 ambient atm 298 2 3D HNCA 1 mM [U-100% 13C; U-100% 15N] entity, 10 mM sodium phosphate 90% H2O/10% D2O 5.4 ambient atm 298 3 3D HNCACB 1 mM [U-100% 13C; U-100% 15N] entity, 10 mM sodium phosphate 90% H2O/10% D2O 5.4 ambient atm 298 4 3D HN(CO)CA 1 mM [U-100% 13C; U-100% 15N] entity, 10 mM sodium phosphate 90% H2O/10% D2O 5.4 ambient atm 298 5 3D CBCA(CO)NH 1 mM [U-100% 13C; U-100% 15N] entity, 10 mM sodium phosphate 90% H2O/10% D2O 5.4 ambient atm 298 6 3D 1H-15N NOESY 1 mM [U-100% 13C; U-100% 15N] entity, 10 mM sodium phosphate 90% H2O/10% D2O 5.4 ambient atm 298 7 3D 1H-13C NOESY aliphatic 1 mM [U-100% 13C; U-100% 15N] entity, 10 mM sodium phosphate 90% H2O/10% D2O 5.4 ambient atm 298 8 3D 1H-13C NOESY aromatic 1 mM [U-100% 13C; U-100% 15N] entity, 10 mM sodium phosphate 90% H2O/10% D2O 5.4 ambient atm 298 9 3D HNCO 1 mM [U-100% 13C; U-100% 15N] entity, 10 mM sodium phosphate 90% H2O/10% D2O 5.4 ambient atm 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 500 2 Bruker AVANCE 800 3 Bruker AVANCE 600
NMR Refinement Method Details Software simulated annealing TopSpin
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 30 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin Bruker Biospin 2 structure solution CYANA Guntert, Mumenthaler and Wuthrich 3 chemical shift assignment XEASY Bartels et al. 4 refinement X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 5 data analysis CcpNmr CCPN