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NMR structure of the protein ZP_02042476.1 from Ruminococcus gnavus
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1.2 mM [U-98% 13C; U-98% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide 95% H2O/5% D2O 0.220 6.0 ambient 298 2 3D 1H-13C NOESY aliphatic 1.2 mM [U-98% 13C; U-98% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide 95% H2O/5% D2O 0.220 6.0 ambient 298 3 3D 1H-13C NOESY aromatic 1.2 mM [U-98% 13C; U-98% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide 95% H2O/5% D2O 0.220 6.0 ambient 298 4 3D 1H-15N NOESY 1.2 mM [U-98% 13C; U-98% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide 95% H2O/5% D2O 0.220 6.0 ambient 298 5 APSY 4D-HACANH 1.2 mM [U-98% 13C; U-98% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide 95% H2O/5% D2O 0.220 6.0 ambient 298 6 APSY 5D-CBCACONH 1.2 mM [U-98% 13C; U-98% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide 95% H2O/5% D2O 0.220 6.0 ambient 298 7 APSY 5D-HACACONH 1.2 mM [U-98% 13C; U-98% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide 95% H2O/5% D2O 0.220 6.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 800
NMR Refinement Method Details Software molecular dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 80 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA G ntert, P. 2 data analysis TopSpin Bruker Biospin 3 processing TopSpin Bruker Biospin 4 collection TopSpin Bruker Biospin 5 chemical shift assignment UNIO 2010 Herrmann ann Wuthrich 6 structure solution UNIO 2010 Herrmann ann Wuthrich 7 peak picking UNIO 2010 Herrmann ann Wuthrich 8 chemical shift assignment CARA Keller and Wuthrich 9 peak picking CARA Keller and Wuthrich 10 refinement OPALp