2MBX

Structure, dynamics and stability of allergen cod parvalbumin Gad m 1 by solution and high-pressure NMR.

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC NH2 only	0.6-1.0 uM [U-100% 13C; U-100% 15N] Gad m 1, 10 mM sodium phosphate, 0.5 mM calcium chloride	90% H2O/10% D2O		7.0	1 atm	298
2	2D 1H-13C HSQC aliphatic	0.6-1.0 uM [U-100% 13C; U-100% 15N] Gad m 1, 10 mM sodium phosphate, 0.5 mM calcium chloride	90% H2O/10% D2O		7.0	1 atm	298
3	2D 1H-13C HSQC aromatic	0.6-1.0 uM [U-100% 13C; U-100% 15N] Gad m 1, 10 mM sodium phosphate, 0.5 mM calcium chloride	90% H2O/10% D2O		7.0	1 atm	298
4	3D CBCA(CO)NH	0.6-1.0 uM [U-100% 13C; U-100% 15N] Gad m 1, 10 mM sodium phosphate, 0.5 mM calcium chloride	90% H2O/10% D2O		7.0	1 atm	298
5	3D HNCO	0.6-1.0 uM [U-100% 13C; U-100% 15N] Gad m 1, 10 mM sodium phosphate, 0.5 mM calcium chloride	90% H2O/10% D2O		7.0	1 atm	298
6	3D HNCA	0.6-1.0 uM [U-100% 13C; U-100% 15N] Gad m 1, 10 mM sodium phosphate, 0.5 mM calcium chloride	90% H2O/10% D2O		7.0	1 atm	298
7	3D HNCACB	0.6-1.0 uM [U-100% 13C; U-100% 15N] Gad m 1, 10 mM sodium phosphate, 0.5 mM calcium chloride	90% H2O/10% D2O		7.0	1 atm	298
8	3D HBHA(CO)NH	0.6-1.0 uM [U-100% 13C; U-100% 15N] Gad m 1, 10 mM sodium phosphate, 0.5 mM calcium chloride	90% H2O/10% D2O		7.0	1 atm	298
9	3D HN(CO)CA	0.6-1.0 uM [U-100% 13C; U-100% 15N] Gad m 1, 10 mM sodium phosphate, 0.5 mM calcium chloride	90% H2O/10% D2O		7.0	1 atm	298
10	3D 1H-15N NOESY	0.6-1.0 uM [U-100% 13C; U-100% 15N] Gad m 1, 10 mM sodium phosphate, 0.5 mM calcium chloride	90% H2O/10% D2O		7.0	1 atm	298
11	3D 1H-13C NOESY aliphatic	0.6-1.0 uM [U-100% 13C; U-100% 15N] Gad m 1, 10 mM sodium phosphate, 0.5 mM calcium chloride	90% H2O/10% D2O		7.0	1 atm	298
12	3D 1H-13C NOESY aromatic	0.6-1.0 uM [U-100% 13C; U-100% 15N] Gad m 1, 10 mM sodium phosphate, 0.5 mM calcium chloride	90% H2O/10% D2O		7.0	1 atm	298
13	3D HCCH-TOCSY	0.6-1.0 uM [U-100% 13C; U-100% 15N] Gad m 1, 10 mM sodium phosphate, 0.5 mM calcium chloride	90% H2O/10% D2O		7.0	1 atm	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	800
2	Bruker	AVANCE	600

NMR Refinement
Method	Details	Software
molecular dynamics		TALOS

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	200
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	structure solution	TALOS	+	Yang Shen
2	chemical shift assignment	CARA	1.8.4	Rochus Keller
3	refinement	CNS

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.