Serine 16 phosphorylated phospholamban pentamer, Hybrid solution and solid-state NMR structural ensemble
SOLUTION NMR - SOLID-STATE NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 0.1 mM [U-100% 13C; U-100% 15N] phospholamban, 300 mM [U-2H] DPC, 20 mM sodium phosphate, 120 mM sodium chloride, 10 mM beta-mercaptoethanol, 0.02 % sodium azide | 95% H2O/5% D2O | 6 | 310 | |||
| 2 | 3D 1H-15N NOESY | 0.1 mM [U-100% 13C; U-100% 15N] phospholamban, 300 mM [U-2H] DPC, 20 mM sodium phosphate, 120 mM sodium chloride, 10 mM beta-mercaptoethanol, 0.02 % sodium azide | 95% H2O/5% D2O | 6 | 310 | |||
| 3 | 3D 1H-15N NOESY | 0.15 mM [U-13C; U-15N; U-2H] phospholamban, 300 mM DPC, 20 mM sodium phosphate, 120 mM sodium chloride, 10 mM beta-mercaptoethanol, 0.02 % sodium azide | 95% H2O/5% D2O | 6 | 310 | |||
| 4 | 2D PISEMA | 4 mg [U-100% 15N] phospholamban, 38 mg DOPC, 9 mg DOPE | 100% H2O | 7 | 298 | |||
| 5 | 2D DARR | 1 mg [U-100% 13C; U-100% 15N] phospholamban, 12 mg DOPC, 3 mg DOPE, 20 mM MOPS, 50 mM sodium chloride, 0.02 % sodium azide | 100% H2O | 7 | 258 | |||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 600 |
| 2 | Varian | INOVA | 700 |
| 3 | Bruker | DMX | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | NMRPipe | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | target function |
| Conformers Calculated Total Number | 200 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | NMRPipe | 7.4 | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |
| 2 | data analysis | Sparky | 3.114 | Goddard |
| 3 | data analysis | MolProbity | David C. Richardson | |
| 4 | data analysis | PSVS | Bhattacharya and Montelione | |
| 5 | structure solution | X-PLOR NIH | 2.33 | Schwieters, Kuszewski, Tjandra and Clore |
| 6 | data analysis | TALOS | Cornilescu, Delaglio and Bax | |
| 7 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |














