2LZG

NMR Structure of Mdm2 (6-125) with Pip-1


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D HNCA500 uM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM [U-100% 2H] DTT90% H2O/10% D2O507.0ambient288.15
23D HNCACB500 uM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM [U-100% 2H] DTT90% H2O/10% D2O507.0ambient288.15
33D CBCA(CO)NH500 uM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM [U-100% 2H] DTT90% H2O/10% D2O507.0ambient288.15
43D HNCO500 uM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM [U-100% 2H] DTT90% H2O/10% D2O507.0ambient288.15
53D HN(CO)CA500 uM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM [U-100% 2H] DTT90% H2O/10% D2O507.0ambient288.15
63D HCCH-TOCSY500 uM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM [U-100% 2H] DTT90% H2O/10% D2O507.0ambient288.15
73D 1H-15N NOESY500 uM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM [U-100% 2H] DTT90% H2O/10% D2O507.0ambient288.15
83D 1H-13C NOESY500 uM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM [U-100% 2H] DTT90% H2O/10% D2O507.0ambient288.15
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance800
2BrukerAvance500
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, DGSA-distance geometry simulated annealingCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number10
Conformers Submitted Total Number5
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentCYANAGuntert, Mumenthaler and Wuthrich
2structure solutionCYANAGuntert, Mumenthaler and Wuthrich
3refinementAMBERCase, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman
4structure solutionAMBERCase, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman