2LYP

NOE-based 3D structure of the monomer of CylR2 in equilibrium with predissociated homodimer at 266K (-7 Celsius degrees)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.52 mM [U-100% 13C; U-100% 15N] CylR2, 600 mM sodium chloride, 50 mM HEPES, 93 % H2O, 7 % D2O93% H2O/7% D2O0.67.0ambient266
22D 1H-13C HSQC aliphatic0.52 mM [U-100% 13C; U-100% 15N] CylR2, 600 mM sodium chloride, 50 mM HEPES, 93 % H2O, 7 % D2O93% H2O/7% D2O0.67.0ambient266
32D 1H-13C HSQC aromatic0.52 mM [U-100% 13C; U-100% 15N] CylR2, 600 mM sodium chloride, 50 mM HEPES, 93 % H2O, 7 % D2O93% H2O/7% D2O0.67.0ambient266
43D 1H-15N NOESY0.52 mM [U-100% 13C; U-100% 15N] CylR2, 600 mM sodium chloride, 50 mM HEPES, 93 % H2O, 7 % D2O93% H2O/7% D2O0.67.0ambient266
53D 1H-13C NOESY aliphatic0.52 mM [U-100% 13C; U-100% 15N] CylR2, 600 mM sodium chloride, 50 mM HEPES, 93 % H2O, 7 % D2O93% H2O/7% D2O0.67.0ambient266
63D 1H-13C NOESY aromatic0.52 mM [U-100% 13C; U-100% 15N] CylR2, 600 mM sodium chloride, 50 mM HEPES, 93 % H2O, 7 % D2O93% H2O/7% D2O0.67.0ambient266
73D HCCH-TOCSY0.52 mM [U-100% 13C; U-100% 15N] CylR2, 600 mM sodium chloride, 50 mM HEPES, 93 % H2O, 7 % D2O93% H2O/7% D2O0.67.0ambient266
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III700
NMR Refinement
MethodDetailsSoftware
simulated annealingCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCYANA3.0Guntert, Mumenthaler and Wuthrich
2refinementX-PLOR NIH2.28Schwieters, Kuszewski, Tjandra and Clore
3chemical shift assignmentSparkyGoddard
4peak pickingSparkyGoddard
5processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax