2LXQ

Monomeric PilE G-Quadruplex DNA from Neisseria Gonorrhoeae


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY0.8 mM 5'-D(*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP *T)-3', 100 mM potassium chloride, 5 mM potassium phosphate, 10 % D2O, 90 % H2O90% H2O/10% D2O0.1056.8ambient298
22D 1H-1H NOESY0.8 mM 5'-D(*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP *T)-3', 100 mM potassium chloride, 5 mM potassium phosphate, 10 % D2O, 90 % H2O90% H2O/10% D2O0.1056.8ambient298
32D 1H-1H TOCSY0.8-6.0 mM 5'-D(*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP *T)-3', 0.8 mM [U-13C; U-15N] 5'-D(*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP *T)-3', 100 mM potassium chloride, 5 mM potassium phosphate, 90 % D2O90% H2O/10% D2O0.1056.8ambient298
41H-15N JRHMQC0.8 mM 5'-D(*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP *T)-3', 100 mM potassium chloride, 5 mM potassium phosphate, 10 % D2O, 90 % H2O90% H2O/10% D2O0.1056.8ambient298
51H-15N HMBC0.8 mM 5'-D(*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP *T)-3', 100 mM potassium chloride, 5 mM potassium phosphate, 10 % D2O, 90 % H2O90% H2O/10% D2O0.1056.8ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2BrukerAvance800
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, molecular dynamics, matrix relaxationX-PLOR
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number12
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementX-PLOR3.851BRUNGER, SCHWIETERS, KUSZEWSKI, TJ