2LWR

Solution Structure of RING2 Domain from Parkin

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 15N] protein_1	90% H2O/10% D2O	0.120	7.25	ambient	298
2	2D 1H-13C HSQC aliphatic	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 13C; U-98% 15N] protein_1	100% D2O	0.120	7.25	ambient	298
3	2D 1H-13C HSQC aromatic	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 13C; U-98% 15N] protein_1	100% D2O	0.120	7.25	ambient	298
4	3D 1H-15N NOESY	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 15N] protein_1	90% H2O/10% D2O	0.120	7.25	ambient	298
5	3D HCCH-TOCSY	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 13C; U-98% 15N] protein_1	100% D2O	0.120	7.25	ambient	298
6	3D 1H-13C NOESY aliphatic	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 13C; U-98% 15N] protein_1	100% D2O	0.120	7.25	ambient	298
7	3D 1H-13C NOESY aromatic	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 13C; U-98% 15N] protein_1	90% H2O/10% D2O	0.120	7.25	ambient	298
8	3D HNCA	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 13C; U-98% 15N] protein_1	90% H2O/10% D2O	0.120	7.25	ambient	298
9	3D HN(CO)CA	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 13C; U-98% 15N] protein_1	90% H2O/10% D2O	0.120	7.25	ambient	298
10	3D HNCACB	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 13C; U-98% 15N] protein_1	90% H2O/10% D2O	0.120	7.25	ambient	298
11	3D CBCA(CO)NH	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 13C; U-98% 15N] protein_1	90% H2O/10% D2O	0.120	7.25	ambient	298
12	3D HNCO	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 13C; U-98% 15N] protein_1	90% H2O/10% D2O	0.120	7.25	ambient	298
13	3D HNHA	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 13C; U-98% 15N] protein_1	90% H2O/10% D2O	0.120	7.25	ambient	298
14	3D C(CO)NH	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 13C; U-98% 15N] protein_1	90% H2O/10% D2O	0.120	7.25	ambient	298
15	3D 1H-13C NOESY aliphatic	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 13C; U-98% 15N] protein_1	90% H2O/10% D2O	0.120	7.25	ambient	298
16	2D (HB)CB(CGCD)HD	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 13C; U-98% 15N] protein_1	90% H2O/10% D2O	0.120	7.25	ambient	298
17	2D (HB)CB(CGCDCE)HE	20 mM TRIS, 120 mM sodium chloride, 5 mM DTT, 500 uM [U-98% 13C; U-98% 15N] protein_1	90% H2O/10% D2O	0.120	7.25	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	600

NMR Refinement
Method	Details	Software
torsion angle dynamics	WITH EXPLICIT SOLVENT AND FULL ELECTROSTATICS	VnmrJ

NMR Ensemble Information
Conformer Selection Criteria	structures with the least restraint violations
Conformers Calculated Total Number	20
Conformers Submitted Total Number	19
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	VnmrJ	Varian VnmrJ 2.2D	Varian
2	processing	NMRPipe	2011.084.20.33	Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	processing	NMRDraw	Ver 5.7 Rev 2011.084.20.33	Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4	data analysis	NMRView	8.2.33 with Java 1.6.0_31	Johnson, One Moon Scientific
5	chemical shift assignment	NMRView	8.2.33 with Java 1.6.0_31	Johnson, One Moon Scientific
6	peak picking	NMRView	8.2.33 with Java 1.6.0_31	Johnson, One Moon Scientific
7	structure solution	CYANA	2.1	Guntert, Mumenthaler and Wuthrich
8	refinement	X-PLOR NIH	2.31	Schwieters, Kuszewski, Tjandra and Clore
9	geometry optimization	TALOS	TALOSPlus	Cornilescu, Delaglio and Bax
10	data analysis	Procheck	3.5.4	Laskowski, MacArthur, Smith, Jones, Hutchinson, Morris, Moss and Tho