2LT4 | pdb_00002lt4

CdnLNt from Myxoccoccus xanthus

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-1H COSY	1 mM CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	298
2	2D 1H-1H TOCSY	1 mM CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	298
3	2D 1H-1H NOESY	1 mM CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	298
4	2D 1H-1H COSY	1 mM CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	100% D2O	0.15	7.0	1 atm	298
5	2D 1H-1H TOCSY	1 mM CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	100% D2O	0.15	7.0	1 atm	298
6	2D 1H-1H NOESY	1 mM CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	100% D2O	0.15	7.0	1 atm	298
7	2D 1H-15N HSQC	1 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	298
8	3D HNCO	1 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	298
9	3D HNCA	1 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	298
10	3D HNCACB	1 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	298
11	3D CBCA(CO)NH	1 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	298
12	3D HBHA(CO)NH	1 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	298
13	2D 1H-13C HSQC aliphatic	1 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	100% D2O	0.15	7.0	1 atm	298
14	3D HCCH-TOCSY	1 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	100% D2O	0.15	7.0	1 atm	298
15	3D 1H-13C NOESY aliphatic	1 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	100% D2O	0.15	7.0	1 atm	298
16	2D 1H-15N HSQC	0.5 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.25 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	298
17	3D HNCA	0.5 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.25 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	298
18	3D CBCA(CO)NH	0.5 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.25 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	298
19	3D HBHA(CO)NH	0.5 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.25 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	298
20	2D 1H-15N HSQC	1 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	288
21	3D HNCO	1 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	288
22	3D HNCA	1 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	288
23	3D HNCACB	1 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	288
24	3D CBCA(CO)NH	1 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	288
25	3D HBHA(CO)NH	1 mM [U-100% 13C; U-100% 15N] CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	1 atm	288
26	2D 1H-13C HSQC aromatic	1 mM CdnLNt, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 0.5 mM DSS	100% D2O	0.15	7.0	1 atm	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	800
2	Bruker	AVANCE	600

NMR Refinement
Method	Details	Software
simulated annealing, molecular dynamics		TopSpin

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	TopSpin		Bruker Biospin
2	processing	TopSpin		Bruker Biospin
3	peak picking	Sparky		Goddard
4	chemical shift assignment	Sparky		Goddard
5	structure solution	CYANA		Guntert, Mumenthaler and Wuthrich
6	refinement	Amber		Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm