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NMR structure of the protein NP_390037.1 from Bacillus subtilis
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 4D APSY-HACANH 1.2 mM [U-98% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 5 mM sodium azide, 50 mM sodium chloride, 5 % [U-99% 2H] D2O, 95 % H2O 95% H2O/5% D2O 0.080 6.0 ambient 313 2 5D APSY-HACACONH 1.2 mM [U-98% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 5 mM sodium azide, 50 mM sodium chloride, 5 % [U-99% 2H] D2O, 95 % H2O 95% H2O/5% D2O 0.080 6.0 ambient 313 3 5D APSY-CBCACONH 1.2 mM [U-98% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 5 mM sodium azide, 50 mM sodium chloride, 5 % [U-99% 2H] D2O, 95 % H2O 95% H2O/5% D2O 0.080 6.0 ambient 313 4 3D 1H-13C NOESY aliphatic 1.2 mM [U-98% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 5 mM sodium azide, 50 mM sodium chloride, 5 % [U-99% 2H] D2O, 95 % H2O 95% H2O/5% D2O 0.080 6.0 ambient 313 5 3D 1H-13C NOESY aromatic 1.2 mM [U-98% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 5 mM sodium azide, 50 mM sodium chloride, 5 % [U-99% 2H] D2O, 95 % H2O 95% H2O/5% D2O 0.080 6.0 ambient 313 6 3D 1H-15N NOESY 1.2 mM [U-98% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 5 mM sodium azide, 50 mM sodium chloride, 5 % [U-99% 2H] D2O, 95 % H2O 95% H2O/5% D2O 0.080 6.0 ambient 313 7 2D 1H-15N HSQC 1.2 mM [U-98% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 5 mM sodium azide, 50 mM sodium chloride, 5 % [U-99% 2H] D2O, 95 % H2O 95% H2O/5% D2O 0.080 6.0 ambient 313
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 800
NMR Refinement Method Details Software molecular dynamics TopSpin
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 80 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin Bruker Biospin 2 processing TopSpin Bruker Biospin 3 data analysis CARA Keller and Wuthrich 4 chemical shift assignment CARA Keller and Wuthrich 5 structure solution CYANA Guntert, Mumenthaler and Wuthrich 6 geometry optimization OPAL Luginbuhl, Guntert, Billeter and Wuthrich 7 refinement OPAL Luginbuhl, Guntert, Billeter and Wuthrich 8 chemical shift assignment UNIO Herrmann and Wuthrich 9 data analysis UNIO Herrmann and Wuthrich 10 structure solution UNIO Herrmann and Wuthrich