2LKW
A Myristoylated Polyproline Type II Helix Functions as a Novel Fusion Peptide During Cell-Cell Membrane Fusion Induced by the Baboon Reovirus p15 FAST Protein
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H TOCSY | 5 mM protein | 90% H2O/10% D2O | 0 | 6.0 | ambient | 298 | |
2 | 2D DQF-COSY | 5 mM protein | 90% H2O/10% D2O | 0 | 6.0 | ambient | 298 | |
3 | 2D 1H-1H NOESY | 5 mM protein | 90% H2O/10% D2O | 0 | 6.0 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | SPARKY |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | chemical shift assignment | SPARKY | 3.1 | Goddard |
2 | data analysis | SPARKY | 3.1 | Goddard |
3 | geometry optimization | X-PLOR_NIH | Schwieters, Kuszewski, Tjandra and Clore | |
4 | refinement | X-PLOR_NIH | Schwieters, Kuszewski, Tjandra and Clore |