2LIC
NMR Structure of the Polyserine Tract of Apis mellifera Vitellogenin, residues 358-392
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 7.8 w/v [U-15N]-ILE Vg, 0.02 % sodium azide, 50 mM sodium phosphate, 5 % DSS | 95% H2O/5% D2O | 0.06 | 6.7 | ambient | 298 | |
2 | 2D 1H-1H TOCSY | 7.8 w/v [U-15N]-ILE Vg, 0.02 % sodium azide, 50 mM sodium phosphate, 5 % DSS | 95% H2O/5% D2O | 0.06 | 6.7 | ambient | 298 | |
3 | 2D 1H-1H NOESY | 7.8 w/v [U-15N]-ILE Vg, 0.02 % sodium azide, 50 mM sodium phosphate, 5 % DSS | 95% H2O/5% D2O | 0.06 | 6.7 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AV | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing, molecular dynamics | ARIA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | data analysis | ARIA | 1.2 | Linge, O'Donoghue and Nilges |
2 | refinement | ARIA | 1.2 | Linge, O'Donoghue and Nilges |