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NMR structure of the first lotus domain of tudor domain-containing protein 7
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1.5 mM [U-100% 15N] protein, 50 mM sodium acetate 90% H2O/10% D2O 0 4.3 ambient 298 2 3D 1H-15N NOESY 1.5 mM [U-100% 15N] protein, 50 mM sodium acetate 90% H2O/10% D2O 0 4.3 ambient 298 3 2D 1H-13C HSQC 1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate 90% H2O/10% D2O 0 4.3 ambient 298 4 2D 1H-13C HSQC aromatic 1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate 90% H2O/10% D2O 0 4.3 ambient 298 5 3D HNCACB 1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate 90% H2O/10% D2O 0 4.3 ambient 298 6 3D CBCA(CO)NH 1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate 90% H2O/10% D2O 0 4.3 ambient 298 7 3D HNCO 1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate 90% H2O/10% D2O 0 4.3 ambient 298 8 3D HN(CA)CO 1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate 90% H2O/10% D2O 0 4.3 ambient 298 9 3D HBHA(CO)NH 1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate 90% H2O/10% D2O 0 4.3 ambient 298 10 3D CCH-TOCSY 1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate 90% H2O/10% D2O 0 4.3 ambient 298 11 3D 1H-15N NOESY 1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate 90% H2O/10% D2O 0 4.3 ambient 298 12 3D 1H-13C NOESY aliphatic 1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate 90% H2O/10% D2O 0 4.3 ambient 298 13 3D 1H-13C NOESY aromatic 1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate 90% H2O/10% D2O 0 4.3 ambient 298 14 2D 1H-15N HSQC 1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate 90% H2O/10% D2O 0 4.3 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 700
NMR Refinement Method Details Software simulated annealing CYANA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA Guntert, Mumenthaler and Wuthrich 2 refinement Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollm 3 chemical shift assignment SANE Duggan, Legge, Dyson & Wright 4 processing NMRView Johnson, One Moon Scientific