2LH8 | pdb_00002lh8

Syrian hamster prion protein with thiamine

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.3 mM [U-100% 15N] shPrP, 10 mM thiamine	90% H2O/10% D2O	0.02	6.2	ambient	298
2	3D 1H-15N NOESY	0.3 mM [U-100% 15N] shPrP, 10 mM thiamine	90% H2O/10% D2O	0.02	6.2	ambient	298
3	3D 1H-15N TOCSY	0.3 mM [U-100% 15N] shPrP, 10 mM thiamine	90% H2O/10% D2O	0.02	6.2	ambient	298
4	1D STD-TOCSY	0.5 mM shPrP, 12.5 mM thiamine	90% H2O/10% D2O	0.02	6.2	ambient	298
5	2D NOESY	0.5 mM shPrP, 10 mM thiamine	90% H2O/10% D2O	0.02	6.2	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	500
2	Varian	INOVA	800

NMR Refinement
Method	Details	Software
simulated annealing		NMRDraw

NMR Ensemble Information
Conformer Selection Criteria	structures with the least restraint violations
Conformers Calculated Total Number	1
Conformers Submitted Total Number	1
Representative Model	1 (fewest violations)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	NMRDraw	3.0	Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2	collection	VnmrJ		Varian
3	chemical shift assignment	NMRView		Johnson, One Moon Scientific
4	peak picking	NMRView		Johnson, One Moon Scientific
5	data analysis	NMRView		Johnson, One Moon Scientific
6	structure solution	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
7	refinement	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore