2LG1

Solution structure of the human AKAP13 PH domain and stabilizing DH helix


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D HNCO0.5 mM [U-100% 13C; U-100% 15N] AKAP13a_A10, 50.0 mM sodium phosphate, 150.0 mM sodium chloride, 0.1 mM Sodium azide90% H2O/10% D2O150.007.001.00 atm293
23D HN(CO)CA0.5 mM [U-100% 13C; U-100% 15N] AKAP13a_A10, 50.0 mM sodium phosphate, 150.0 mM sodium chloride, 0.1 mM Sodium azide90% H2O/10% D2O150.007.001.00 atm293
3CBCAcoNH (H[N[co[{CA|ca[C]}]]])0.5 mM [U-100% 13C; U-100% 15N] AKAP13a_A10, 50.0 mM sodium phosphate, 150.0 mM sodium chloride, 0.1 mM Sodium azide90% H2O/10% D2O150.007.001.00 atm293
43D HNCACB0.5 mM [U-100% 13C; U-100% 15N] AKAP13a_A10, 50.0 mM sodium phosphate, 150.0 mM sodium chloride, 0.1 mM Sodium azide90% H2O/10% D2O150.007.001.00 atm293
53D HNCA0.5 mM [U-100% 13C; U-100% 15N] AKAP13a_A10, 50.0 mM sodium phosphate, 150.0 mM sodium chloride, 0.1 mM Sodium azide90% H2O/10% D2O150.007.001.00 atm293
6CCH TOCSY (hC_CH.TOCSY)0.5 mM [U-100% 13C; U-100% 15N] AKAP13a_A10, 50.0 mM sodium phosphate, 150.0 mM sodium chloride, 0.1 mM Sodium azide90% H2O/10% D2O150.007.001.00 atm293
73D HCCH-TOCSY0.5 mM [U-100% 13C; U-100% 15N] AKAP13a_A10, 50.0 mM sodium phosphate, 150.0 mM sodium chloride, 0.1 mM Sodium azide90% H2O/10% D2O150.007.001.00 atm293
83D 1H-13C NOESY0.5 mM [U-100% 13C; U-100% 15N] AKAP13a_A10, 50.0 mM sodium phosphate, 150.0 mM sodium chloride, 0.1 mM Sodium azide90% H2O/10% D2O150.007.001.00 atm293
93D 1H-13C NOESY0.5 mM [U-100% 13C; U-100% 15N] AKAP13a_A10, 50.0 mM sodium phosphate, 150.0 mM sodium chloride, 0.1 mM Sodium azide90% H2O/10% D2O150.007.001.00 atm293
103D 1H-15N NOESY0.5 mM [U-100% 13C; U-100% 15N] AKAP13a_A10, 50.0 mM sodium phosphate, 150.0 mM sodium chloride, 0.1 mM Sodium azide90% H2O/10% D2O150.007.001.00 atm293
112D 1H-15N HSQC/HMQC0.5 mM [U-100% 13C; U-100% 15N] AKAP13a_A10, 50.0 mM sodium phosphate, 150.0 mM sodium chloride, 0.1 mM Sodium azide90% H2O/10% D2O150.007.001.00 atm293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUnityInova900
NMR Refinement
MethodDetailsSoftware
simulated annealingARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structureARIA2.1Linge, O'Donoghue and Nilges
2assignmentCcpNmr_Analysis2.1CCPN
3processingNMR_pipeNMRpipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4refinementARIA2.1Linge, O'Donoghue and Nilges