2LFG

Solution structure of the human prolactin receptor ecd domain d2


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM TCEP, 1 mM DSS, 0.02 % sodium azide90% H2O/10% D2O7.4ambient298
22D 1H-13C HSQC0.5 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM TCEP, 1 mM DSS, 0.02 % sodium azide90% H2O/10% D2O7.4ambient298
33D C(CO)NH0.5 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM TCEP, 1 mM DSS, 0.02 % sodium azide90% H2O/10% D2O7.4ambient298
43D HNCO0.5 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM TCEP, 1 mM DSS, 0.02 % sodium azide90% H2O/10% D2O7.4ambient298
53D HNCA0.5 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM TCEP, 1 mM DSS, 0.02 % sodium azide90% H2O/10% D2O7.4ambient298
63D HNCACB0.5 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM TCEP, 1 mM DSS, 0.02 % sodium azide90% H2O/10% D2O7.4ambient298
73D HN(CO)CA0.5 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM TCEP, 1 mM DSS, 0.02 % sodium azide90% H2O/10% D2O7.4ambient298
83D H(CCO)NH0.5 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM TCEP, 1 mM DSS, 0.02 % sodium azide90% H2O/10% D2O7.4ambient298
93D CBCA(CO)NH0.5 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM TCEP, 1 mM DSS, 0.02 % sodium azide90% H2O/10% D2O7.4ambient298
103D HN(CA)CO0.5 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM TCEP, 1 mM DSS, 0.02 % sodium azide90% H2O/10% D2O7.4ambient298
113D 1H-15N NOESY0.5 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM TCEP, 1 mM DSS, 0.02 % sodium azide90% H2O/10% D2O7.4ambient298
123D 1H-15N TOCSY0.5 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM TCEP, 1 mM DSS, 0.02 % sodium azide90% H2O/10% D2O7.4ambient298
133D HCCH-TOCSY0.5 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM TCEP, 1 mM DSS, 0.02 % sodium azide90% H2O/10% D2O7.4ambient298
143D 1H-13C NOESY aliphatic0.5 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM TCEP, 1 mM DSS, 0.02 % sodium azide90% H2O/10% D2O7.4ambient298
153D 1H-13C NOESY aromatic0.5 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM TCEP, 1 mM DSS, 0.02 % sodium azide90% H2O/10% D2O7.4ambient298
162D 1H-13C HSQC aromatic0.5 mM [U-100% 13C(1)] protein, 10 mM sodium phosphate, 10 mM TCEP, 0.02 % sodium azide, 1 mM DSS100% D2O7.4ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA800
2BrukerAvance800
NMR Refinement
MethodDetailsSoftware
simulated annealingAutoAssign
NMR Ensemble Information
Conformer Selection Criteria
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentAutoAssign2.3.0Zimmerman, Moseley, Kulikowski and Montelione
2chemical shift assignmentCYANA2.2.1Guntert, Mumenthaler and Wuthrich
3structure solutionX-PLOR_NIH2.25Schwieters, Kuszewski, Tjandra and Clore
4geometry optimizationTALOSCornilescu, Delaglio and Bax
5processingNMRDrawDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
6peak pickingCCPN2.1.5CCPN
7water refinementARIA2.3.2Linge, O'Donoghue and Nilges
8refinementX-PLOR_NIHSchwieters, Kuszewski, Tjandra and Clore