2LFA

Oligonucleotide duplex contaning (5'S)-8,5'-cyclo-2'-deoxyguansine


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY1.0 mM DNA (5'-D(*GP*TP*GP*CP*TP*GP*TP*TP*TP*GP*T)-3'), 1.0 mM DNA (5'-D(*AP*CP*AP*AP*AP*CP*AP*CP*GP*CP*AP*C)-3')100% D2O1007.0ambient298
22D 1H-1H COSY1.0 mM DNA (5'-D(*GP*TP*GP*CP*TP*GP*TP*TP*TP*GP*T)-3'), 1.0 mM DNA (5'-D(*AP*CP*AP*AP*AP*CP*AP*CP*GP*CP*AP*C)-3')100% D2O1007.0ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
simulated annealingAmber
NMR Ensemble Information
Conformer Selection Criteriaback calculated data agree with experimental NOESY spectrum
Conformers Calculated Total Number10
Conformers Submitted Total Number1
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementAmber10Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollm