2LF3

Solution NMR structure of HopPmaL_281_385 from Pseudomonas syringae pv. maculicola str. ES4326, Midwest Center for Structural Genomics target APC40104.5 and Northeast Structural Genomics Consortium target PsT2A


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D HNCO0.3 mM [U-100% 13C; U-100% 15N] HopPmaL_281_385, 10 mM [U-100% 2H] TRIS, 300 mM sodium chloride, 10 uM zinc sulphate, 10 mM [U-100% 2H] DTT, 0.01 % NaN3, 10 mM benzamidine, 1 x inhibitor cocktail90% H2O/10% D2O3007.0ambient298
23D CBCA(CO)NH0.3 mM [U-100% 13C; U-100% 15N] HopPmaL_281_385, 10 mM [U-100% 2H] TRIS, 300 mM sodium chloride, 10 uM zinc sulphate, 10 mM [U-100% 2H] DTT, 0.01 % NaN3, 10 mM benzamidine, 1 x inhibitor cocktail90% H2O/10% D2O3007.0ambient298
33D HBHA(CO)NH0.3 mM [U-100% 13C; U-100% 15N] HopPmaL_281_385, 10 mM [U-100% 2H] TRIS, 300 mM sodium chloride, 10 uM zinc sulphate, 10 mM [U-100% 2H] DTT, 0.01 % NaN3, 10 mM benzamidine, 1 x inhibitor cocktail90% H2O/10% D2O3007.0ambient298
43D HNCA0.3 mM [U-100% 13C; U-100% 15N] HopPmaL_281_385, 10 mM [U-100% 2H] TRIS, 300 mM sodium chloride, 10 uM zinc sulphate, 10 mM [U-100% 2H] DTT, 0.01 % NaN3, 10 mM benzamidine, 1 x inhibitor cocktail90% H2O/10% D2O3007.0ambient298
53D HCCH-TOCSY0.3 mM [U-100% 13C; U-100% 15N] HopPmaL_281_385, 10 mM [U-100% 2H] TRIS, 300 mM sodium chloride, 10 uM zinc sulphate, 10 mM [U-100% 2H] DTT, 0.01 % NaN3, 10 mM benzamidine, 1 x inhibitor cocktail90% H2O/10% D2O3007.0ambient298
63D CCH-TOCSY0.3 mM [U-100% 13C; U-100% 15N] HopPmaL_281_385, 10 mM [U-100% 2H] TRIS, 300 mM sodium chloride, 10 uM zinc sulphate, 10 mM [U-100% 2H] DTT, 0.01 % NaN3, 10 mM benzamidine, 1 x inhibitor cocktail90% H2O/10% D2O3007.0ambient298
73D 1H-15N NOESY0.3 mM [U-100% 13C; U-100% 15N] HopPmaL_281_385, 10 mM [U-100% 2H] TRIS, 300 mM sodium chloride, 10 uM zinc sulphate, 10 mM [U-100% 2H] DTT, 0.01 % NaN3, 10 mM benzamidine, 1 x inhibitor cocktail90% H2O/10% D2O3007.0ambient298
83D 1H-15N NOESY1 mM [U-100% 13C; U-100% 15N] HopPmaL,_281_385, 10 mM [U-100% 2H] TRIS 300 mM sodium chloride, 10 uM zinc sulphate, 10 mM [U-100% 2H] DTT, 0.01 % NaN3, 10 mM benzamidine, 1 x inhibitor cocktail90% H2O/10% D2O3007.0ambient298
93D 1H-13C NOESY0.3 mM [U-100% 13C; U-100% 15N] HopPmaL_281_385, 10 mM [U-100% 2H] TRIS, 300 mM sodium chloride, 10 uM zinc sulphate, 10 mM [U-100% 2H] DTT, 0.01 % NaN3, 10 mM benzamidine, 1 x inhibitor cocktail90% H2O/10% D2O3007.0ambient298
103D 1H-13C NOESY1 mM [U-100% 13C; U-100% 15N] HopPmaL,_281_385, 10 mM [U-100% 2H] TRIS 300 mM sodium chloride, 10 uM zinc sulphate, 10 mM [U-100% 2H] DTT, 0.01 % NaN3, 10 mM benzamidine, 1 x inhibitor cocktail90% H2O/10% D2O3007.0ambient298
113D 1H-13C NOESY aromatic0.3 mM [U-100% 13C; U-100% 15N] HopPmaL_281_385, 10 mM [U-100% 2H] TRIS, 300 mM sodium chloride, 10 uM zinc sulphate, 10 mM [U-100% 2H] DTT, 0.01 % NaN3, 10 mM benzamidine, 1 x inhibitor cocktail90% H2O/10% D2O3007.0ambient298
123D 1H-13C NOESY aromatic1 mM [U-100% 13C; U-100% 15N] HopPmaL,_281_385, 10 mM [U-100% 2H] TRIS 300 mM sodium chloride, 10 uM zinc sulphate, 10 mM [U-100% 2H] DTT, 0.01 % NaN3, 10 mM benzamidine, 1 x inhibitor cocktail90% H2O/10% D2O3007.0ambient298
132D 1H-13C HSQC0.2 mM [U-7% 13C; U-100% 15N] HopPmaL_281_385, 10 mM [U-100% 2H] TRIS, 300 mM sodium chloride, 10 uM zinc sulphate, 10 mM [U-100% 2H] DTT, 0.01 % NaN3, 10 mM benzamidine, 1 x inhibitor cocktail90% H2O/10% D2O3007.0ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
simulated annealingNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe2.3Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2processingMDDGUI1.0Gutmanas, Arrowsmith
3data analysisSparky3.95Goddard
4chemical shift assignmentFMCGUI2.4Lemak, Arrowsmith
5structure solutionCYANA3.0Guntert, Mumenthaler and Wuthrich
6refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read
7nmr structure quality assessmentAutoStructureHuang, Tejero, Powers and Montelione
8nmr structure quality assessmentPSVSBhattacharya and Montelione
9chemical shift assignmentFAWNLemak, Arrowsmith