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human prion protein mutant HuPrP(90-231, M129, V210I)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.6 mM [U-100% 13C; U-100% 15N] protein 90% H2O/10% D2O 0.1 5.5 ambient 298 2 2D 1H-13C HSQC aliphatic 0.6 mM [U-100% 13C; U-100% 15N] protein 100% D2O 3 2D 1H-13C HSQC aromatic 0.6 mM [U-100% 13C; U-100% 15N] protein 100% D2O 4 3D HNCO 0.6 mM [U-100% 13C; U-100% 15N] protein 90% H2O/10% D2O 0.1 5.5 ambient 298 5 3D HNCA 0.6 mM [U-100% 13C; U-100% 15N] protein 90% H2O/10% D2O 0.1 5.5 ambient 298 6 3D HNCACB 0.6 mM [U-100% 13C; U-100% 15N] protein 90% H2O/10% D2O 0.1 5.5 ambient 298 7 3D HBHA(CO)NH 0.6 mM [U-100% 13C; U-100% 15N] protein 90% H2O/10% D2O 0.1 5.5 ambient 298 8 3D 1H-15N NOESY 0.6 mM [U-100% 13C; U-100% 15N] protein 90% H2O/10% D2O 0.1 5.5 ambient 298 9 3D 1H-13C NOESY aliphatic 0.6 mM [U-100% 13C; U-100% 15N] protein 100% D2O 10 3D 1H-13C NOESY aromatic 0.6 mM [U-100% 13C; U-100% 15N] protein 100% D2O 11 3D HCCH-TOCSY 0.6 mM [U-100% 13C; U-100% 15N] protein 100% D2O
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian Uniform NMR System 800
NMR Refinement Method Details Software molecular dynamics NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 chemical shift assignment Sparky 3.115 Goddard 3 peak picking Sparky 3.115 Goddard 4 structure solution CYANA 3.0 Guntert, Mumenthaler and Wuthrich 5 refinement YASARA 11.5.22 YASARA Biosciences 6 data analysis ProcheckNMR Laskowski and MacArthur 7 data analysis WHAT IF Vriend