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solution structure of tandem UBA of USP13
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 20 mM sodium phosphate-1, 50 mM sodium chloride-2, 1 mM [U-100% 15N] entity-3 90% H2O/10% D2O 6.5 1 atm 298 2 3D CBCA(CO)NH 20 mM sodium phosphate-4, 50 mM sodium chloride-5, 1 mM [U-100% 13C; U-100% 15N] entity-6 90% H2O/10% D2O 6.5 1 atm 298 3 3D HNCACB 20 mM sodium phosphate-4, 50 mM sodium chloride-5, 1 mM [U-100% 13C; U-100% 15N] entity-6 90% H2O/10% D2O 6.5 1 atm 298 4 3D C(CO)NH 20 mM sodium phosphate-4, 50 mM sodium chloride-5, 1 mM [U-100% 13C; U-100% 15N] entity-6 90% H2O/10% D2O 6.5 1 atm 298 5 3D HNHA 20 mM sodium phosphate-1, 50 mM sodium chloride-2, 1 mM [U-100% 15N] entity-3 90% H2O/10% D2O 6.5 1 atm 298 6 3D HCCH-TOCSY 20 mM sodium phosphate-4, 50 mM sodium chloride-5, 1 mM [U-100% 13C; U-100% 15N] entity-6 90% H2O/10% D2O 6.5 1 atm 298 7 3D 1H-15N NOESY 20 mM sodium phosphate-1, 50 mM sodium chloride-2, 1 mM [U-100% 15N] entity-3 90% H2O/10% D2O 6.5 1 atm 298 8 3D 1H-13C NOESY 20 mM sodium phosphate-4, 50 mM sodium chloride-5, 1 mM [U-100% 13C; U-100% 15N] entity-6 90% H2O/10% D2O 6.5 1 atm 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software torsion angle dynamics ARIA2.0
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 15 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution ARIA2.0 Linge, O'Donoghue and Nilges 2 refinement ARIA2.0 Linge, O'Donoghue and Nilges 3 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 4 peak picking Sparky Goddard 5 chemical shift assignment Sparky Goddard 6 data analysis TALOS Cornilescu, Delaglio and Bax 7 data analysis ProcheckNMR Laskowski and MacArthur