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Solution structure of the protein YP_546394.1, the first structural representative of the pfam family PF12112
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1.2 mM [U-98% 13C; U-98% 15N] YP_546394.1, 20 mM sodium phosphate, 50 mM sodium chloride, 4.5 mM sodium azide 95% H2O/5% D2O 0.113 6.0 ambient 298 2 2D 1H-13C HSQC 1.2 mM [U-98% 13C; U-98% 15N] YP_546394.1, 20 mM sodium phosphate, 50 mM sodium chloride, 4.5 mM sodium azide 95% H2O/5% D2O 0.113 6.0 ambient 298 3 4D APSY - HACANH 1.2 mM [U-98% 13C; U-98% 15N] YP_546394.1, 20 mM sodium phosphate, 50 mM sodium chloride, 4.5 mM sodium azide 95% H2O/5% D2O 0.113 6.0 ambient 298 4 5D APSY - HACACONH 1.2 mM [U-98% 13C; U-98% 15N] YP_546394.1, 20 mM sodium phosphate, 50 mM sodium chloride, 4.5 mM sodium azide 95% H2O/5% D2O 0.113 6.0 ambient 298 5 5D APSY - CBCACONH 1.2 mM [U-98% 13C; U-98% 15N] YP_546394.1, 20 mM sodium phosphate, 50 mM sodium chloride, 4.5 mM sodium azide 95% H2O/5% D2O 0.113 6.0 ambient 298 6 15N resolved [1H,1H]-NOESY 1.2 mM [U-98% 13C; U-98% 15N] YP_546394.1, 20 mM sodium phosphate, 50 mM sodium chloride, 4.5 mM sodium azide 95% H2O/5% D2O 0.113 6.0 ambient 298 7 13Cali resolved [1H,1H]-NOESY 1.2 mM [U-98% 13C; U-98% 15N] YP_546394.1, 20 mM sodium phosphate, 50 mM sodium chloride, 4.5 mM sodium azide 95% H2O/5% D2O 0.113 6.0 ambient 298 8 13Caro resolved [1H,1H]-NOESY 1.2 mM [U-98% 13C; U-98% 15N] YP_546394.1, 20 mM sodium phosphate, 50 mM sodium chloride, 4.5 mM sodium azide 95% H2O/5% D2O 0.113 6.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 800 3 Bruker AVANCE 600
NMR Refinement Method Details Software molecular dynamics energy refinement CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 80 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 structure calculation CYANA 3.0 Guntert P. 2 chemical shift assignment UNIO 2.0.0 Herrmann and Wuthrich 3 peak picking UNIO 2.0.0 Herrmann and Wuthrich 4 noe assignment UNIO 2.0.0 Herrmann and Wuthrich 5 structure solution UNIO 2.0.0 Herrmann and Wuthrich 6 chemical shift assignment CARA 1.5.3 Keller and Wuthrich 7 data collection TopSpin 1.3 Bruker Biospin 8 processing TopSpin 1.3 Bruker Biospin 9 energy refinement OPALp 1.2 Koradi,Billeter and Guntert 10 refinement OPALp