2L95
Solution Structure of Cytotoxic T-Lymphocyte Antigent-2(Ctla protein), Crammer at pH 6.0
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.3 mM [U-99% 15N] CRAMMER-1, 10 mM Citric-acid phosphate-2 | 90% H2O/10% D2O | 6 | ambient | 298 | ||
2 | 2D DQF-COSY | 0.5 mM CRAMMER-5, 10 mM Citric-acid phosphate-6 | 10mM citric-acid phosphate | 6 | ambient | 298 | ||
3 | 2D 1H-1H COSY | 0.5 mM CRAMMER-5, 10 mM Citric-acid phosphate-6 | 10mM citric-acid phosphate | 6 | ambient | 298 | ||
4 | 2D 1H-1H NOESY | 0.5 mM CRAMMER-5, 10 mM Citric-acid phosphate-6 | 10mM citric-acid phosphate | 6 | ambient | 298 | ||
5 | 3D CBCA(CO)NH | 0.5 mM [U-99% 13C; U-99% 15N] CRAMMER-3, 10 mM Citric-acid phosphate-4 | 90% H2O/10% D2O | 6 | ambient | 298 | ||
6 | 3D HNCO | 0.5 mM [U-99% 13C; U-99% 15N] CRAMMER-3, 10 mM Citric-acid phosphate-4 | 90% H2O/10% D2O | 6 | ambient | 298 | ||
7 | 3D HNCA | 0.5 mM [U-99% 13C; U-99% 15N] CRAMMER-3, 10 mM Citric-acid phosphate-4 | 90% H2O/10% D2O | 6 | ambient | 298 | ||
8 | 3D HNCACB | 0.5 mM [U-99% 13C; U-99% 15N] CRAMMER-3, 10 mM Citric-acid phosphate-4 | 90% H2O/10% D2O | 6 | ambient | 298 | ||
9 | 3D HBHA(CO)NH | 0.5 mM [U-99% 13C; U-99% 15N] CRAMMER-3, 10 mM Citric-acid phosphate-4 | 90% H2O/10% D2O | 6 | ambient | 298 | ||
10 | 3D HN(CO)CA | 0.5 mM [U-99% 13C; U-99% 15N] CRAMMER-3, 10 mM Citric-acid phosphate-4 | 90% H2O/10% D2O | 6 | ambient | 298 | ||
11 | 3D 1H-15N NOESY | 0.5 mM [U-99% 13C; U-99% 15N] CRAMMER-3, 10 mM Citric-acid phosphate-4 | 90% H2O/10% D2O | 6 | ambient | 298 | ||
12 | 3D 1H-15N TOCSY | 0.5 mM [U-99% 13C; U-99% 15N] CRAMMER-3, 10 mM Citric-acid phosphate-4 | 90% H2O/10% D2O | 6 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AMX | 600 |
NMR Refinement | ||
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Method | Details | Software |
SIMULATED ANNEALING, MOLECULAR DYNAMICS | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 500 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | CNS | 1.1 | BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE, JIANG,KUSZEWSKI,NILGES,PANNU,READ,RICE,SIMONSON,WARREN |
2 | data analysis | CNS | 1.1 | BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE, JIANG,KUSZEWSKI,NILGES,PANNU,READ,RICE,SIMONSON,WARREN |
3 | structure solution | Sparky | Goddard | |
4 | chemical shift assignment | Sparky | Goddard | |
5 | chemical shift calculation | Sparky | Goddard | |
6 | peak picking | Sparky | Goddard | |
7 | structure solution | PSVS | Bhattacharya and Montelione | |
8 | data analysis | PSVS | Bhattacharya and Montelione | |
9 | structure solution | MOLMOL | Koradi, Billeter and Wuthrich | |
10 | collection | MOLMOL | Koradi, Billeter and Wuthrich | |
11 | data analysis | MOLMOL | Koradi, Billeter and Wuthrich |