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Biophysical studies of lipid interacting regions of DGD2 in Arabidopsis thaliana
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H TOCSY 0.5 mM atDGD2_S227_245, 50 mM [U-2H] DPC, 10 % [U-2H] D2O, 50 mM sodium phosphate 90% H2O/10% D2O 50 5.7 ambient 298 2 2D 1H-1H NOESY 0.5 mM atDGD2_S227_245, 50 mM [U-2H] DPC, 10 % [U-2H] D2O, 50 mM sodium phosphate 90% H2O/10% D2O 50 5.7 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 500
NMR Refinement Method Details Software torsion angle dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 23 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA Guntert, Mumenthaler and Wuthrich 2 chemical shift assignment Sparky Goddard 3 data analysis Sparky Goddard 4 peak picking Sparky Goddard 5 collection TopSpin Bruker Biospin 6 processing TopSpin Bruker Biospin 7 refinement CYANA Guntert, Mumenthaler and Wuthrich