2L4X

Solution Structure of apo-IscU(WT)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-15N NOESY1.4 mM [U-13C; U-15N] IscU, 20 mM TRIS, 5 mM DTT, 0.7 mM DSS, 150 mM sodium chloride, 0.5 mM EDTA93% H2O/7% D2O1508.0AMBIENT298
23D 1H-13C NOESY1.4 mM [U-13C; U-15N] IscU, 20 mM TRIS, 5 mM DTT, 0.7 mM DSS, 150 mM sodium chloride, 0.5 mM EDTA93% H2O/7% D2O1508.0AMBIENT298
32D 1H-15N HSQC0.7-0.8 mM [U-15N] IscU, 20 mM TRIS, 5 mM DTT, 150 mM sodium chloride, 0.7 mM DSS, 0.5 mM EDTA93% H2O/7% D2O1508.0AMBIENT298
42D 1H-13C HSQC1.4 mM [U-13C; U-15N] IscU, 20 mM TRIS, 5 mM DTT, 0.7 mM DSS, 150 mM sodium chloride, 0.5 mM EDTA93% H2O/7% D2O1508.0AMBIENT298
53D CBCA(CO)NH1.4 mM [U-13C; U-15N] IscU, 20 mM TRIS, 5 mM DTT, 0.7 mM DSS, 150 mM sodium chloride, 0.5 mM EDTA93% H2O/7% D2O1508.0AMBIENT298
63D C(CO)NH1.4 mM [U-13C; U-15N] IscU, 20 mM TRIS, 5 mM DTT, 0.7 mM DSS, 150 mM sodium chloride, 0.5 mM EDTA93% H2O/7% D2O1508.0AMBIENT298
73D HNCO1.4 mM [U-13C; U-15N] IscU, 20 mM TRIS, 5 mM DTT, 0.7 mM DSS, 150 mM sodium chloride, 0.5 mM EDTA93% H2O/7% D2O1508.0AMBIENT298
83D HNCACB1.4 mM [U-13C; U-15N] IscU, 20 mM TRIS, 5 mM DTT, 0.7 mM DSS, 150 mM sodium chloride, 0.5 mM EDTA93% H2O/7% D2O1508.0AMBIENT298
93D HBHA(CO)NH1.4 mM [U-13C; U-15N] IscU, 20 mM TRIS, 5 mM DTT, 0.7 mM DSS, 150 mM sodium chloride, 0.5 mM EDTA93% H2O/7% D2O1508.0AMBIENT298
103D H(CCO)NH1.4 mM [U-13C; U-15N] IscU, 20 mM TRIS, 5 mM DTT, 0.7 mM DSS, 150 mM sodium chloride, 0.5 mM EDTA93% H2O/7% D2O1508.0AMBIENT298
113D HCCH-TOCSY1.4 mM [U-13C; U-15N] IscU, 20 mM TRIS, 5 mM DTT, 0.7 mM DSS, 150 mM sodium chloride, 0.5 mM EDTA93% H2O/7% D2O1508.0AMBIENT298
122D IPAP 1H-15N HSQC0.7-0.8 mM [U-15N] IscU, 20 mM TRIS, 5 mM DTT, 150 mM sodium chloride, 0.7 mM DSS, 0.5 mM EDTA, 12 mg/mL Pf1 phage93% H2O/7% D2O1508.0AMBIENT298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2VarianINOVA800
3VarianINOVA900
4BrukerDMX750
NMR Refinement
MethodDetailsSoftware
TORSION ANGLE DYNAMICS, simulated annealingCYANA_3.0_intel
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCYANA_3.0_intel3.0_intelP.GUNTERT ET AL.
2structure solutionCYANA_3.0_intel3.0_intelP.GUNTERT ET AL.
3collectionVnmrJVarian
4chemical shift assignmentSparkyGoddard
5peak pickingSparkyGoddard
6data analysisSparkyGoddard
7processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
8data analysisNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax