2L2R

Helical hairpin structure of a novel antimicrobial peptide EcAMP1 from seeds of barnyard grass (Echinochloa crus-galli)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY0.7 mg/mL EcAMP1, 10 mM KOH95% H2O/5% D2O106.621 atm293
22D 1H-1H TOCSY0.7 mg/mL EcAMP1, 10 mM KOH95% H2O/5% D2O106.621 atm293
32D DQF-COSY0.7 mg/mL EcAMP1, 10 mM KOH95% H2O/5% D2O106.621 atm293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
simulated annealingSimulated annealing in torsion angle space implemented in CYANACYANA
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCYANA2.1Guntert, Mumenthaler and Wuthrich
2refinementCYANA2.1Guntert, Mumenthaler and Wuthrich