2L1A | pdb_00002l1a

Solution NMR structure of the N-terminal GTPase-like domain of dictyostelium discoideum Fomin C

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
2	2D 1H-13C HSQC	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
3	3D HNCA	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
4	3D CCONH-TOCSY	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
5	3D CBCANH	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
6	3D HNHA	1.03 mM [U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 % sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
7	3D HCCH-TOCSY	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
8	3D HNHB	1.03 mM [U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 % sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
9	3D HACAHB-COSY	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
10	3D HNCO	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
11	2D 13C-{13CO}-1H-13C HSQC	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
12	2D 13C-{15N}-1H-13C HSQC	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
13	3D 1H-15N NOESY	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
14	3D 1H-13C NOESY aliphatic	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
15	3D 1H-13C NOESY aromatic	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
16	3D 1H-13C NOESY aliphatic	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	100% D2O	0.1	6.5	ambient	293
17	2D 1H-15N HSQC-IPAP	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 v/v sodium azide, 8.6 w/v C12E5, 2 v/v hexanol	95% H2O/5% D2O	0.1	6.5	ambient	293
18	3D HN(CO)CA_Jcaha	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 v/v sodium azide, 8.6 w/v C12E5, 2 v/v hexanol	95% H2O/5% D2O	0.1	6.5	ambient	293
19	3D HN(CO)CA_Jcacb	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 v/v sodium azide, 8.6 w/v C12E5, 2 v/v hexanol	95% H2O/5% D2O	0.1	6.5	ambient	293
20	{1H}-15N-NOE	1.03 mM [U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 % sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
21	15N-T1	1.03 mM [U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 % sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
22	15N-T2	1.03 mM [U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 % sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
23	2D 1H-15N HSQC	1.03 mM [U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 % sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
24	2D 1H-13C HSQC	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
25	2D 1H-15N HSQC	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	95% H2O/5% D2O	0.1	6.5	ambient	293
26	2D 1H-13C HSQC	1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide	100% D2O	0.1	6.5	ambient	293

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	DRX	600
2	Bruker	DRX	800

NMR Refinement
Method	Details	Software
torsion angle dynamics, simulated annealing, final refinement in water-shell		NMRPipe

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	200
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2	data analysis	NMRDraw		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	chemical shift assignment	NMRView		Johnson, One Moon Scientific
4	peak picking	NMRView		Johnson, One Moon Scientific
5	refinement	X-PLOR