2L1A

Solution NMR structure of the N-terminal GTPase-like domain of dictyostelium discoideum Fomin C


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide95% H2O/5% D2O0.16.5ambient293
22D 1H-13C HSQC1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide95% H2O/5% D2O0.16.5ambient293
33D HNCA1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide95% H2O/5% D2O0.16.5ambient293
43D CCONH-TOCSY1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide95% H2O/5% D2O0.16.5ambient293
53D CBCANH1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide95% H2O/5% D2O0.16.5ambient293
63D HNHA1.03 mM [U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 % sodium azide95% H2O/5% D2O0.16.5ambient293
73D HCCH-TOCSY1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide95% H2O/5% D2O0.16.5ambient293
83D HNHB1.03 mM [U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 % sodium azide95% H2O/5% D2O0.16.5ambient293
93D HACAHB-COSY1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide95% H2O/5% D2O0.16.5ambient293
103D HNCO1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide95% H2O/5% D2O0.16.5ambient293
112D 13C-{13CO}-1H-13C HSQC1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide95% H2O/5% D2O0.16.5ambient293
122D 13C-{15N}-1H-13C HSQC1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide95% H2O/5% D2O0.16.5ambient293
133D 1H-15N NOESY1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide95% H2O/5% D2O0.16.5ambient293
143D 1H-13C NOESY aliphatic1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide95% H2O/5% D2O0.16.5ambient293
153D 1H-13C NOESY aromatic1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide95% H2O/5% D2O0.16.5ambient293
163D 1H-13C NOESY aliphatic1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide100% D2O0.16.5ambient293
172D 1H-15N HSQC-IPAP1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 v/v sodium azide, 8.6 w/v C12E5, 2 v/v hexanol95% H2O/5% D2O0.16.5ambient293
183D HN(CO)CA_Jcaha1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 v/v sodium azide, 8.6 w/v C12E5, 2 v/v hexanol95% H2O/5% D2O0.16.5ambient293
193D HN(CO)CA_Jcacb1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 v/v sodium azide, 8.6 w/v C12E5, 2 v/v hexanol95% H2O/5% D2O0.16.5ambient293
20{1H}-15N-NOE1.03 mM [U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 % sodium azide95% H2O/5% D2O0.16.5ambient293
2115N-T11.03 mM [U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 % sodium azide95% H2O/5% D2O0.16.5ambient293
2215N-T21.03 mM [U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 % sodium azide95% H2O/5% D2O0.16.5ambient293
232D 1H-15N HSQC1.03 mM [U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2 % sodium azide95% H2O/5% D2O0.16.5ambient293
242D 1H-13C HSQC1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide95% H2O/5% D2O0.16.5ambient293
252D 1H-15N HSQC1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide95% H2O/5% D2O0.16.5ambient293
262D 1H-13C HSQC1.03 mM [U-100% 13C; U-100% 15N] forC/ A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.2% sodium azide100% D2O0.16.5ambient293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
2BrukerDRX800
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, simulated annealing, final refinement in water-shellNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2data analysisNMRDrawDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3chemical shift assignmentNMRViewJohnson, One Moon Scientific
4peak pickingNMRViewJohnson, One Moon Scientific
5refinementX-PLOR