2KVI | pdb_00002kvi

Structure of Nab3 RRM

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D HNCA	2.5 mM [U-99% 13C; U-99% 15N] RNA-binding protein-1	90% H2O/10% D2O	0.3	8	1 atm	303
2	3D HCACO	2.5 mM [U-99% 13C; U-99% 15N] RNA-binding protein-1	90% H2O/10% D2O	0.3	8	1 atm	303
3	3D CBCA(CO)NH	2.5 mM [U-99% 13C; U-99% 15N] RNA-binding protein-1	90% H2O/10% D2O	0.3	8	1 atm	303
4	3D HNCACB	2.5 mM [U-99% 13C; U-99% 15N] RNA-binding protein-1	90% H2O/10% D2O	0.3	8	1 atm	303
5	2D 1H-13C HSQC	2.5 mM [U-99% 13C; U-99% 15N] RNA-binding protein-1	90% H2O/10% D2O	0.3	8	1 atm	303
6	3D 1H-13C NOESY	2.5 mM [U-99% 13C; U-99% 15N] RNA-binding protein-1	90% H2O/10% D2O	0.3	8	1 atm	303
7	3D 1H-15N NOESY	2.5 mM [U-99% 13C; U-99% 15N] RNA-binding protein-1	90% H2O/10% D2O	0.3	8	1 atm	303
8	3D HNHA	2.5 mM [U-99% 13C; U-99% 15N] RNA-binding protein-1	90% H2O/10% D2O	0.3	8	1 atm	303
9	3D HCCH-TOCSY	2.5 mM [U-99% 13C; U-99% 15N] RNA-binding protein-1	90% H2O/10% D2O	0.3	8	1 atm	303
10	2D HB(CB)(CGCD)HD	2.5 mM [U-99% 13C; U-99% 15N] RNA-binding protein-1	90% H2O/10% D2O	0.3	8	1 atm	303

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	600
2	Bruker	AVANCE	900

NMR Refinement
Method	Details	Software
torsion angle dynamics, molecular dynamics		CYANA

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	40
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	structure solution	CYANA	2.1	Guntert, Mumenthaler and Wuthrich
2	refinement	Amber	9.0	Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
3	data analysis	MOLMOL		Koradi, Billeter and Wuthrich
4	chemical shift assignment	Sparky		Goddard
5	peak picking	Sparky		Goddard
6	processing	TopSpin	2.1	Bruker Biospin
7	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax