2KTF

Solution NMR structure of human polymerase iota UBM2 in complex with ubiquitin

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1 mM [U-100% 13C; U-100% 15N] protein, 3.5 mM peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
2	2D 1H-15N HSQC	2.5 mM protein, 0.5 mM [U-100% 13C; U-100% 15N] peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
3	2D 1H-13C HSQC	1 mM [U-100% 13C; U-100% 15N] protein, 3.5 mM peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
4	2D 1H-13C HSQC	2.5 mM protein, 0.5 mM [U-100% 13C; U-100% 15N] peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
5	3D HNCACB	1 mM [U-100% 13C; U-100% 15N] protein, 3.5 mM peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
6	3D HNCA	2.5 mM protein, 0.5 mM [U-100% 13C; U-100% 15N] peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
7	3D CBCA(CO)NH	1 mM [U-100% 13C; U-100% 15N] protein, 3.5 mM peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
8	3D CBCA(CO)NH	2.5 mM protein, 0.5 mM [U-100% 13C; U-100% 15N] peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
9	3D HNCO	1 mM [U-100% 13C; U-100% 15N] protein, 3.5 mM peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
10	3D HNCO	2.5 mM protein, 0.5 mM [U-100% 13C; U-100% 15N] peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
11	3D HCACO	2.5 mM protein, 0.5 mM [U-100% 13C; U-100% 15N] peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
12	3D C(CO)NH	1 mM [U-100% 13C; U-100% 15N] protein, 3.5 mM peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
13	3D H(CCO)NH	1 mM [U-100% 13C; U-100% 15N] protein, 3.5 mM peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
14	3D HCCH-TOCSY	1 mM [U-100% 13C; U-100% 15N] protein, 3.5 mM peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
15	3D HCCH-TOCSY	2.5 mM protein, 0.5 mM [U-100% 13C; U-100% 15N] peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
16	3D 1H-15N NOESY	1 mM [U-100% 13C; U-100% 15N] protein, 3.5 mM peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
17	3D 1H-15N NOESY	2.5 mM protein, 0.5 mM [U-100% 13C; U-100% 15N] peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
18	3D 1H-13C NOESY	1 mM [U-100% 13C; U-100% 15N] protein, 3.5 mM peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
19	3D 1H-13C NOESY	2.5 mM protein, 0.5 mM [U-100% 13C; U-100% 15N] peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
20	3D HBHA(CO)NH	1 mM [U-100% 13C; U-100% 15N] protein, 3.5 mM peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
21	3D HBHA(CO)NH	2.5 mM protein, 0.5 mM [U-100% 13C; U-100% 15N] peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
22	3D 13C edited double-filtered	1 mM [U-100% 13C; U-100% 15N] protein, 3.5 mM peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301
23	3D 13C edited double-filtered	2.5 mM protein, 0.5 mM [U-100% 13C; U-100% 15N] peptide, 20 mM sodium phosphate, 30 mM sodium chloride, 0.001 % sodium azide	90% H2O/10% D2O	0.08	7.0	ambient	301

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	Avance III	700

NMR Refinement
Method	Details	Software
simulated annealing		NMRPipe

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	200
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	NMRPipe	2.1	Delaglio, F. et al.
2	chemical shift assignment	NMRView	5.0.4	Johnson, B. et al.
3	peak picking	NMRView	5.0.4	Johnson, B. et al.
4	structure solution	CYANA	2.1	Guntert, P. et al.
5	chemical shift assignment	SANE		Duggan, B. et al.
6	refinement	AMBER	8	Case, D. et al.