2KSD

Backbone structure of the membrane domain of E. coli histidine kinase receptor ArcB, Center for Structures of Membrane Proteins (CSMP) target 4310C


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5 mM DSS, 20 mM sodium acetate, 200 mM 1-myristoyl-2-hydroxy-sn-glycero-3-[phospho-rac-(1-glycerol)], 10 mM sodium chloride, 0.5 mM [U-98% 13C; U-98% 15N] Protein95% H2O/5% D2O5.5ambient318
22D 1H-15N HSQC0.5 mM DSS, 100 mM 1-myristoyl-2-hydroxy-sn-glycero-3-[phospho-rac-(1-glycerol)], 20 mM Mes-BisTris, 0.3 mM [U-99% 13C; U-99% 15N] Protein95% H2O/5% D2O5.5ambient318
33D 1H-15N NOESY0.5 mM DSS, 20 mM sodium acetate, 200 mM 1-myristoyl-2-hydroxy-sn-glycero-3-[phospho-rac-(1-glycerol)], 10 mM sodium chloride, 0.5 mM [U-98% 13C; U-98% 15N] Protein95% H2O/5% D2O5.5ambient318
43D 1H-15N NOESY0.5 mM DSS, 100 mM 1-myristoyl-2-hydroxy-sn-glycero-3-[phospho-rac-(1-glycerol)], 20 mM Mes-BisTris, 0.3 mM [U-99% 13C; U-99% 15N] Protein95% H2O/5% D2O5.5ambient318
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE900
2BrukerAVANCE700
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, simulated annealingCYANA
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCYANA1.0.6Guntert, Mumenthaler and Wuthrich
2collectionTopSpin2.1Bruker Biospin
3peak pickingCARA1.8.4Keller and Wuthrich
4data analysisCARA1.8.4Keller and Wuthrich
5structure visualization and analysisMOLMOL2K.2Koradi, Billeter and Wuthrich
6refinementCYANA1.0.6Guntert, Mumenthaler and Wuthrich