2KOQ

NMR solution structures of 3-hydroxyoctanoyl-ACP from Streptomyces coelicolor Fatty Acid Synthase


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC10mM potassium phosphate-1, 0.5 mM sodium azide-2, 1mM 3-hydroxyoctanoyl phosphopantetheine-3, 1mM [U-99% 13C; U-99% 15N] ACP-495% H2O/5% D2O107.0ambient298
23D 1H-15N NOESY10mM potassium phosphate-1, 0.5 mM sodium azide-2, 1mM 3-hydroxyoctanoyl phosphopantetheine-3, 1mM [U-99% 13C; U-99% 15N] ACP-495% H2O/5% D2O107.0ambient298
33D 1H-13C NOESY10mM potassium phosphate-1, 0.5 mM sodium azide-2, 1mM 3-hydroxyoctanoyl phosphopantetheine-3, 1mM [U-99% 13C; U-99% 15N] ACP-495% H2O/5% D2O107.0ambient298
42D F2 13C Filtered NOESY10mM potassium phosphate-5, 0.5mM sodium azide-6, 1mM 3-hydroxyoctanoyl phosphopantetheine-7, 1mM [U-99% 13C; U-99% 15N] ACP-895% H2O/5% D2O107.0ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealing20 best structures from last iteration were selected for water refinement. Water refined structures were calculated using the slightly modified refinement script applied to the RECOORD database.ARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementARIA1.2Linge, O'Donoghue, Nilges
2structure solutionARIA1.2Linge, O'Donoghue, Nilges
3processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4data analysisCCPN_Analysis1.0Fogh, Vranken, Boucher, Stevens, Laue
5peak pickingCCPN_Analysis1.0Fogh, Vranken, Boucher, Stevens, Laue
6chemical shift assignmentCCPN_Analysis1.0Fogh, Vranken, Boucher, Stevens, Laue