SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
| 2 | 2D DQF-COSY | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
| 3 | 2D 1H-1H NOESY | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
| 4 | 2D 1H-1H TOCSY | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
| 5 | 3D 1H-15N NOESY | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
| 6 | 3D 1H-13C NOESY | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
| 7 | 3D HCCH-TOCSY | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
| 8 | 3D HNCACB | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
| 9 | 3D HN(CO)CA | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
| 10 | 3D HNCO | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
| 11 | 3D HNHA | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | XPLOR-NIH WAS USED FOR REFINING THE FOLDED PROTEINS. DIHERAL ANGLE RESTRAINTS AND PRE RESTRAINTS WERE ADDED DURING REFINEMENT. | X-PLOR NIH |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 20 |
| Conformers Submitted Total Number | 10 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | structure solution | X-PLOR NIH | 2.20 | Schwieters, Kuszewski, Tjandra and Clore |
| 2 | chemical shift assignment | ANALYSIS | 1.0.15 | CCPN |
| 3 | data analysis | NMRDraw | 2.2 | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |
| 4 | refinement | X-PLOR NIH | 2.20 | Schwieters, Kuszewski, Tjandra and Clore |
