2KNY

Fusion construct of CR17 from LRP-1 and ApoE residues 130-149


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC20 mM [U-99% 2H] HEPES-1, 50 mM sodium chloride-2, 3 mM sodium azide-3, 5 mM CALCIUM ION-4, 0.8 mM [U-99% 13C; U-99% 15N] entity_1-590% H2O/10% D2O0.057.45ambient298
22D 1H-13C HSQC20 mM [U-99% 2H] HEPES-1, 50 mM sodium chloride-2, 3 mM sodium azide-3, 5 mM CALCIUM ION-4, 0.8 mM [U-99% 13C; U-99% 15N] entity_1-590% H2O/10% D2O0.057.45ambient298
33D CBCA(CO)NH20 mM [U-99% 2H] HEPES-1, 50 mM sodium chloride-2, 3 mM sodium azide-3, 5 mM CALCIUM ION-4, 0.8 mM [U-99% 13C; U-99% 15N] entity_1-590% H2O/10% D2O0.057.45ambient298
43D C(CO)NH20 mM [U-99% 2H] HEPES-1, 50 mM sodium chloride-2, 3 mM sodium azide-3, 5 mM CALCIUM ION-4, 0.8 mM [U-99% 13C; U-99% 15N] entity_1-590% H2O/10% D2O0.057.45ambient298
53D HNCO20 mM [U-99% 2H] HEPES-1, 50 mM sodium chloride-2, 3 mM sodium azide-3, 5 mM CALCIUM ION-4, 0.8 mM [U-99% 13C; U-99% 15N] entity_1-590% H2O/10% D2O0.057.45ambient298
63D HCCH-TOCSY20 mM [U-99% 2H] HEPES-6, 50 mM sodium chloride-7, 3 mM sodium azide-8, 5 mM CALCIUM ION-9, 0.8 mM [U-99% 13C; U-99% 15N] entity_1-10100% D2O0.057.45ambient298
73D 1H-15N NOESY20 mM [U-99% 2H] HEPES-1, 50 mM sodium chloride-2, 3 mM sodium azide-3, 5 mM CALCIUM ION-4, 0.8 mM [U-99% 13C; U-99% 15N] entity_1-590% H2O/10% D2O0.057.45ambient298
83D 1H-13C NOESY20 mM [U-99% 2H] HEPES-6, 50 mM sodium chloride-7, 3 mM sodium azide-8, 5 mM CALCIUM ION-9, 0.8 mM [U-99% 13C; U-99% 15N] entity_1-10100% D2O0.057.45ambient298
93D HCCH-COSY20 mM [U-99% 2H] HEPES-6, 50 mM sodium chloride-7, 3 mM sodium azide-8, 5 mM CALCIUM ION-9, 0.8 mM [U-99% 13C; U-99% 15N] entity_1-10100% D2O0.057.45ambient298
102D 1H-15N HSQC20 mM [U-99% 2H] HEPES-21, 150 mM sodium chloride-22, 3 mM sodium azide-23, 2 mM [U-99% 2H] EDTA-24, 0.5 mM [U-99% 13C; U-99% 15N] entity_2-2590% H2O/10% D2O0.157.45ambient298
112D 1H-13C HSQC20 mM [U-99% 2H] HEPES-21, 150 mM sodium chloride-22, 3 mM sodium azide-23, 2 mM [U-99% 2H] EDTA-24, 0.5 mM [U-99% 13C; U-99% 15N] entity_2-2590% H2O/10% D2O0.157.45ambient298
123D CBCA(CO)NH20 mM [U-99% 2H] HEPES-21, 150 mM sodium chloride-22, 3 mM sodium azide-23, 2 mM [U-99% 2H] EDTA-24, 0.5 mM [U-99% 13C; U-99% 15N] entity_2-2590% H2O/10% D2O0.157.45ambient298
133D HNCO20 mM [U-99% 2H] HEPES-21, 150 mM sodium chloride-22, 3 mM sodium azide-23, 2 mM [U-99% 2H] EDTA-24, 0.5 mM [U-99% 13C; U-99% 15N] entity_2-2590% H2O/10% D2O0.157.45ambient298
143D HCCH-COSY20 mM [U-99% 2H] HEPES-21, 150 mM sodium chloride-22, 3 mM sodium azide-23, 2 mM [U-99% 2H] EDTA-24, 0.5 mM [U-99% 13C; U-99% 15N] entity_2-2590% H2O/10% D2O0.157.45ambient298
152D 1H-15N HSQC20 mM [U-99% 2H] HEPES-16, 150 mM sodium chloride-17, 3 mM sodium azide-18, 2 mM [U-99% 2H] EDTA-19, 0.5 mM [U-99% 15N] entity_2-2090% H2O/10% D2O0.157.45ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
DGSA-distance geometry simulated annealingAzara
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number328
Conformers Submitted Total Number20
Representative Model9 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingAzara2.7Boucher
2refinementARIA2.2Linge, O'Donoghue and Nilges
3chemical shift assignmentARIA2.2Linge, O'Donoghue and Nilges
4refinementCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read
5structure solutionCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read
6chemical shift assignmentNMRPipeGoddard
7data analysisNMRPipeGoddard
8peak pickingNMRPipeGoddard
9refinementTALOSCornilescu, Delaglio and Bax
10chemical shift assignmentSparky3.113Goddard
11data analysisSparky3.113Goddard
12peak pickingSparky3.113Goddard