2KNG
Solution structure of C-domain of Lsr2
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.8mM [U-13C; U-15N] Lsr2C-1 | 90% H2O/10% D2O | 100 | 6 | ambient | 298 | |
2 | 3D HNCACB | 0.8mM [U-13C; U-15N] Lsr2C-1 | 90% H2O/10% D2O | 100 | 6 | ambient | 298 | |
3 | 3D CBCA(CO)NH | 0.8mM [U-13C; U-15N] Lsr2C-1 | 90% H2O/10% D2O | 100 | 6 | ambient | 298 | |
4 | 3D HBHA(CO)NH | 0.8mM [U-13C; U-15N] Lsr2C-1 | 90% H2O/10% D2O | 100 | 6 | ambient | 298 | |
5 | 3D HCCH-COSY | 0.8mM [U-13C; U-15N] Lsr2C-1 | 90% H2O/10% D2O | 100 | 6 | ambient | 298 | |
6 | 3D 1H-15N NOESY | 0.8mM [U-13C; U-15N] Lsr2C-1 | 90% H2O/10% D2O | 100 | 6 | ambient | 298 | |
7 | 3D 1H-13C NOESY | 0.8mM [U-13C; U-15N] Lsr2C-1 | 90% H2O/10% D2O | 100 | 6 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | Amber |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | Amber | 9 | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer, Bax |
2 | processing | Amber | 9 | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer, Bax |
3 | chemical shift assignment | Amber | 9 | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer, Bax |
4 | data analysis | Amber | 9 | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer, Bax |
5 | processing | Amber | 9 | Johnson, One Moon Scientific |
6 | chemical shift assignment | Amber | 9 | Johnson, One Moon Scientific |
7 | data analysis | Amber | 9 | Johnson, One Moon Scientific |
8 | processing | Amber | 9 | Duggan, Legge, Dyson, Wright |
9 | chemical shift assignment | Amber | 9 | Duggan, Legge, Dyson, Wright |
10 | data analysis | Amber | 9 | Duggan, Legge, Dyson, Wright |
11 | processing | Amber | 9 | Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, Kollm |
12 | chemical shift assignment | Amber | 9 | Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, Kollm |
13 | data analysis | Amber | 9 | Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, Kollm |