2KN4

The structure of the RRM domain of SC35


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5 mM [U-100% 13C; U-100% 15N] SC35-190% H2O/10% D2O1006.8ambient305
22D 1H-13C HSQC0.5 mM [U-100% 13C; U-100% 15N] SC35-2100% D2O1006.8ambient305
33D CBCA(CO)NH0.5 mM [U-100% 13C; U-100% 15N] SC35-190% H2O/10% D2O1006.8ambient305
43D HNCO0.5 mM [U-100% 13C; U-100% 15N] SC35-190% H2O/10% D2O1006.8ambient305
53D HNCA0.5 mM [U-100% 13C; U-100% 15N] SC35-190% H2O/10% D2O1006.8ambient305
63D HNCACB0.5 mM [U-100% 13C; U-100% 15N] SC35-190% H2O/10% D2O1006.8ambient305
73D HBHA(CO)NH0.5 mM [U-100% 13C; U-100% 15N] SC35-190% H2O/10% D2O1006.8ambient305
83D HN(CO)CA0.5 mM [U-100% 13C; U-100% 15N] SC35-190% H2O/10% D2O1006.8ambient305
93D HBHANH0.5 mM [U-100% 13C; U-100% 15N] SC35-190% H2O/10% D2O1006.8ambient305
103D HCCH-TOCSY0.5 mM [U-100% 13C; U-100% 15N] SC35-2100% D2O1006.8ambient305
112D 1H-1H TOCSY0.5 mM SC35-4100% D2O1006.8ambient305
122D 1H-1H NOESY0.5 mM SC35-4100% D2O1006.8ambient305
133D 1H-15N NOESY0.5 mM [U-100% 15N] SC35-390% H2O/10% D2O1006.8ambient305
143D 1H-13C NOESY0.5 mM [U-100% 13C; U-100% 15N] SC35-190% H2O/10% D2O1006.8ambient305
153D 1H-13C NOESY0.5 mM [U-100% 13C; U-100% 15N] SC35-2100% D2O1006.8ambient305
163D HN(CA)CO0.5 mM [U-100% 13C; U-100% 15N] SC35-190% H2O/10% D2O1006.8ambient305
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
2BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
simulated annealing, molecular dynamics, torsion angle dynamicsFINAL STRUCTURES REFINED IN EXPLICIT WATER BATH AS IMPLEMENTED IN ARIA 1.2/CNS 1.1. 20 LOWEST ENERGY STRUCTURES SELECTED FROM WATER REFINEMENT USING CNS. INITIAL STRUCTURES GENERATED WITH CYANATopSpin
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpinBruker Biospin
2processingTopSpinBruker Biospin
3chemical shift assignmentCCPN_Analysis1CCPN
4data analysisCCPN_Analysis1CCPN
5peak pickingCCPN_Analysis1CCPN
6geometry optimizationARIA1.2Linge, O'Donoghue and Nilges
7structure solutionARIA1.2Linge, O'Donoghue and Nilges
8refinementARIA1.2Linge, O'Donoghue and Nilges
9geometry optimizationCYANA2Guntert, Mumenthaler and Wuthrich
10structure solutionCYANA2Guntert, Mumenthaler and Wuthrich
11chemical shift assignmentCYANA2Guntert, Mumenthaler and Wuthrich