SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 0.5 mM [U-100% 13C; U-100% 15N] SC35-1 | 90% H2O/10% D2O | 100 | 6.8 | ambient | 305 | |
| 2 | 2D 1H-13C HSQC | 0.5 mM [U-100% 13C; U-100% 15N] SC35-2 | 100% D2O | 100 | 6.8 | ambient | 305 | |
| 3 | 3D CBCA(CO)NH | 0.5 mM [U-100% 13C; U-100% 15N] SC35-1 | 90% H2O/10% D2O | 100 | 6.8 | ambient | 305 | |
| 4 | 3D HNCO | 0.5 mM [U-100% 13C; U-100% 15N] SC35-1 | 90% H2O/10% D2O | 100 | 6.8 | ambient | 305 | |
| 5 | 3D HNCA | 0.5 mM [U-100% 13C; U-100% 15N] SC35-1 | 90% H2O/10% D2O | 100 | 6.8 | ambient | 305 | |
| 6 | 3D HNCACB | 0.5 mM [U-100% 13C; U-100% 15N] SC35-1 | 90% H2O/10% D2O | 100 | 6.8 | ambient | 305 | |
| 7 | 3D HBHA(CO)NH | 0.5 mM [U-100% 13C; U-100% 15N] SC35-1 | 90% H2O/10% D2O | 100 | 6.8 | ambient | 305 | |
| 8 | 3D HN(CO)CA | 0.5 mM [U-100% 13C; U-100% 15N] SC35-1 | 90% H2O/10% D2O | 100 | 6.8 | ambient | 305 | |
| 9 | 3D HBHANH | 0.5 mM [U-100% 13C; U-100% 15N] SC35-1 | 90% H2O/10% D2O | 100 | 6.8 | ambient | 305 | |
| 10 | 3D HCCH-TOCSY | 0.5 mM [U-100% 13C; U-100% 15N] SC35-2 | 100% D2O | 100 | 6.8 | ambient | 305 | |
| 11 | 2D 1H-1H TOCSY | 0.5 mM SC35-4 | 100% D2O | 100 | 6.8 | ambient | 305 | |
| 12 | 2D 1H-1H NOESY | 0.5 mM SC35-4 | 100% D2O | 100 | 6.8 | ambient | 305 | |
| 13 | 3D 1H-15N NOESY | 0.5 mM [U-100% 15N] SC35-3 | 90% H2O/10% D2O | 100 | 6.8 | ambient | 305 | |
| 14 | 3D 1H-13C NOESY | 0.5 mM [U-100% 13C; U-100% 15N] SC35-1 | 90% H2O/10% D2O | 100 | 6.8 | ambient | 305 | |
| 15 | 3D 1H-13C NOESY | 0.5 mM [U-100% 13C; U-100% 15N] SC35-2 | 100% D2O | 100 | 6.8 | ambient | 305 | |
| 16 | 3D HN(CA)CO | 0.5 mM [U-100% 13C; U-100% 15N] SC35-1 | 90% H2O/10% D2O | 100 | 6.8 | ambient | 305 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 800 |
| 2 | Bruker | AVANCE | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing, molecular dynamics, torsion angle dynamics | FINAL STRUCTURES REFINED IN EXPLICIT WATER BATH AS IMPLEMENTED IN ARIA 1.2/CNS 1.1. 20 LOWEST ENERGY STRUCTURES SELECTED FROM WATER REFINEMENT USING CNS. INITIAL STRUCTURES GENERATED WITH CYANA | TopSpin |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | TopSpin | Bruker Biospin | |
| 2 | processing | TopSpin | Bruker Biospin | |
| 3 | chemical shift assignment | CCPN_Analysis | 1 | CCPN |
| 4 | data analysis | CCPN_Analysis | 1 | CCPN |
| 5 | peak picking | CCPN_Analysis | 1 | CCPN |
| 6 | geometry optimization | ARIA | 1.2 | Linge, O'Donoghue and Nilges |
| 7 | structure solution | ARIA | 1.2 | Linge, O'Donoghue and Nilges |
| 8 | refinement | ARIA | 1.2 | Linge, O'Donoghue and Nilges |
| 9 | geometry optimization | CYANA | 2 | Guntert, Mumenthaler and Wuthrich |
| 10 | structure solution | CYANA | 2 | Guntert, Mumenthaler and Wuthrich |
| 11 | chemical shift assignment | CYANA | 2 | Guntert, Mumenthaler and Wuthrich |
