☰ Navigation Tabs
Solution structure of an endopeptidase from Escherichia coli
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 50mM sodium phosphate-1, 50mM sodium chloride-2, 0.5mM [U-13C; U-15N] protein-3 90% H2O/10% D2O 100 7.0 ambient 298 2 3D 1H-15N NOESY 50mM sodium phosphate-1, 50mM sodium chloride-2, 0.5mM [U-13C; U-15N] protein-3 90% H2O/10% D2O 100 7.0 ambient 298 3 3D 1H-13C NOESY 50mM sodium phosphate-1, 50mM sodium chloride-2, 0.5mM [U-13C; U-15N] protein-3 90% H2O/10% D2O 100 7.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 500 2 Bruker AVANCE 600
NMR Refinement Method Details Software simulated annealing NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 21 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer, Bax 2 data analysis NMRView Johnson, One Moon Scientific 3 refinement Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, Kollm 4 collection XwinNMR Bruker Biospin