2KM1

Solution structure of the N-terminal domain of the yeast protein Dre2


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D DQF-COSY1mM N-Dre2, 1mM [U-99% 2H] DTT, 100mM sodium chloride, 50mM sodium phosphate93% H2O/7% D2O0.26.8ambient298
22D 1H-1H NOESY1mM N-Dre2, 1mM [U-99% 2H] DTT, 100mM sodium chloride, 50mM sodium phosphate93% H2O/7% D2O0.26.8ambient298
32D 1H-1H TOCSY1mM N-Dre2, 1mM [U-99% 2H] DTT, 100mM sodium chloride, 50mM sodium phosphate93% H2O/7% D2O0.26.8ambient298
42D 1H-1H TOCSY1mM N-Dre2, 1mM [U-99% 2H] DTT, 100mM sodium chloride, 50mM sodium phosphate100% D2O0.26.8ambient298
52D 1H-1H NOESY1mM N-Dre2, 1mM [U-99% 2H] DTT, 100mM sodium chloride, 50mM sodium phosphate100% D2O0.26.8ambient298
62D DQF-COSY1mM N-Dre2, 1mM [U-99% 2H] DTT, 100mM sodium chloride, 50mM sodium phosphate100% D2O0.26.8ambient298
72D 1H-15N HSQC1mM N-Dre2, 1mM [U-99% 2H] DTT, 100mM sodium chloride, 50mM sodium phosphate93% H2O/7% D2O0.26.8ambient298
83D 1H-15N NOESYHSQC1mM N-Dre2, 1mM [U-99% 2H] DTT, 100mM sodium chloride, 50mM sodium phosphate93% H2O/7% D2O0.26.8ambient298
93D 1H-15N TOCSYHSQC1mM N-Dre2, 1mM [U-99% 2H] DTT, 100mM sodium chloride, 50mM sodium phosphate93% H2O/7% D2O0.26.8ambient298
103D HNCO1mM N-Dre2, 1mM [U-99% 2H] DTT, 100mM sodium chloride, 50mM sodium phosphate93% H2O/7% D2O0.26.8ambient298
113D HN(CA)CO1mM N-Dre2, 1mM [U-99% 2H] DTT, 100mM sodium chloride, 50mM sodium phosphate93% H2O/7% D2O0.26.8ambient298
123D HNCA1mM N-Dre2, 1mM [U-99% 2H] DTT, 100mM sodium chloride, 50mM sodium phosphate93% H2O/7% D2O0.26.8ambient298
133D HN(CO)CA1mM N-Dre2, 1mM [U-99% 2H] DTT, 100mM sodium chloride, 50mM sodium phosphate93% H2O/7% D2O0.26.8ambient298
143D HNCACB1mM N-Dre2, 1mM [U-99% 2H] DTT, 100mM sodium chloride, 50mM sodium phosphate93% H2O/7% D2O0.26.8ambient298
153D 1H-13C NOESY1mM N-Dre2, 1mM [U-99% 2H] DTT, 100mM sodium chloride, 50mM sodium phosphate100% D2O0.26.8ambient298
163D 1H-13 HCCH-TOCSY1mM N-Dre2, 1mM [U-99% 2H] DTT, 100mM sodium chloride, 50mM sodium phosphate100% D2O0.26.8ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUNITY500
2BrukerAMX600
NMR Refinement
MethodDetailsSoftware
simulated annealingSimulated annealing under experimental restraints and the force field cvffDiscover
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionDiscoverI2005Accelrys Software Inc.
2chemical shift assignmentFelix2000.1Accelrys Software Inc.
3refinementDiscoverI2005Accelrys Software Inc.