Anti-group A streptococcal vaccine epitope: structure, stability and its ability to interact with HLA class II molecules
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D DQF-COSY | 5.4 mg/mL | trifluoroethanol/water 30/70% | 3.7 | ambient atm | 295 | ||
| 2 | 2D 1H-1H TOCSY | 5.4 mg/mL | trifluoroethanol/water 30/70% | 3.7 | ambient atm | 295 | ||
| 3 | 2D 1H-1H NOESY | 5.4 mg/mL | trifluoroethanol/water 30/70% | 3.7 | ambient atm | 295 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| DGSA-distance geometry simulated annealing | TopSpin | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 50 |
| Conformers Submitted Total Number | 1 |
| Representative Model | 1 (n/a) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | TopSpin | Bruker Biospin | |
