A PH domain within OCRL bridges clathrin mediated membrane trafficking to phosphoinositide metabolism
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
| 2 | 3D HNCO | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
| 3 | 3D HNCA | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
| 4 | 3D CBCA(CO)NH | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
| 5 | 3D C(CO)NH | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
| 6 | 3D HN(CO)CA | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
| 7 | 3D H(CCO)NH | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
| 8 | 3D HCCH-TOCSY | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
| 9 | 3D 1H-15N NOESY | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
| 10 | 3D 1H-13C NOESY | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | NMRDraw | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 200 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | NMRDraw | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
| 2 | peak picking | Sparky | Goddard | |
| 3 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |














