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Solution Structure of the Coiled-coil Domain of Synphilin-1
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.2mM [U-15N] Synphilin-1, 20mM sodium phosphate, 50mM sodium chloride 90% H2O/10% D2O 6.0 ambient 298 2 3D HNHA 1mM [U-100% 15N] Synphilin-1, 20mM sodium phosphate, 50mM sodium chloride 90% H2O/10% D2O 6.0 ambient 298 3 3D 1H-15N NOESY 1mM [U-100% 15N] Synphilin-1, 20mM sodium phosphate, 50mM sodium chloride 90% H2O/10% D2O 6.0 ambient 298 4 3D HNCACB 1mM [U-13C; U-15N] Synphilin-1, 20mM sodium phosphate, 50mM sodium chloride 90% H2O/10% D2O 6.0 ambient 298 5 3D CBCA(CO)NH 1mM [U-13C; U-15N] Synphilin-1, 20mM sodium phosphate, 50mM sodium chloride 90% H2O/10% D2O 6.0 ambient 298 6 3D HBHA(CO)NH 1mM [U-13C; U-15N] Synphilin-1, 20mM sodium phosphate, 50mM sodium chloride 90% H2O/10% D2O 6.0 ambient 298 7 3D HNCO 1mM [U-13C; U-15N] Synphilin-1, 20mM sodium phosphate, 50mM sodium chloride 90% H2O/10% D2O 6.0 ambient 298 8 3D HCCH-TOCSY 1mM [U-13C; U-15N] Synphilin-1, 20mM sodium phosphate, 50mM sodium chloride 90% H2O/10% D2O 6.0 ambient 298 9 3D 1H-13C NOESY 1mM [U-13C; U-15N] Synphilin-1, 20mM sodium phosphate, 50mM sodium chloride 90% H2O/10% D2O 6.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 600
NMR Refinement Method Details Software torsion angle dynamics NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 15 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 peak picking Sparky Goddard 3 chemical shift assignment Sparky Goddard 4 structure solution ARIA Linge, O'Donoghue and Nilges 5 refinement ARIA Linge, O'Donoghue and Nilges 6 data analysis ProcheckNMR Laskowski and MacArthur