2KDS | pdb_00002kds

Structure of Ribosomal Protein L14e from Sulfolobus solfataricus

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1 mM [U-100% 15N] L14e ribosomal protein-3, 0.2 mM DSS-4	90% H2O/10% D2O	0	5.0	ambient	303
2	3D HNCO	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1	90% H2O/10% D2O	0	5.0	ambient	303
3	3D HNCACB	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1	90% H2O/10% D2O	0	5.0	ambient	303
4	3D CBCA(CO)NH	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1	90% H2O/10% D2O	0	5.0	ambient	303
5	3D HNCA	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1	90% H2O/10% D2O	0	5.0	ambient	303
6	3D HN(CO)CA	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1	90% H2O/10% D2O	0	5.0	ambient	303
7	3D HNHA	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1	90% H2O/10% D2O	0	5.0	ambient	303
8	3D HCC_TOCSY-NNH	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1	90% H2O/10% D2O	0	5.0	ambient	303
9	3D CCC-TOCSY-NNH	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1	90% H2O/10% D2O	0	5.0	ambient	303
10	3D HCCH-TOCSY	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-2	100% D2O	0	5.0	ambient	303
11	3D HCCH-COSY	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-2	100% D2O	0	5.0	ambient	303
12	HBCBCGCDHD	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1	90% H2O/10% D2O	0	5.0	ambient	303
13	2D DQF-COSY	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1	90% H2O/10% D2O	0	5.0	ambient	303
14	2D 1H-1H NOESY	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1	90% H2O/10% D2O	0	5.0	ambient	303
15	2D 1H-13C HSQC	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1	90% H2O/10% D2O	0	5.0	ambient	303
16	3D 1H-15N NOESY	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1	90% H2O/10% D2O	0	5.0	ambient	303
17	3D 1H-13C NOESY	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-2	100% D2O	0	5.0	ambient	303
18	2D 1H-15N HSQC	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-2	100% D2O	0	5.0	ambient	303
19	2D 1H-15N NOE	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1	90% H2O/10% D2O	0	5.0	ambient	303
20	2D 1H-15N T1	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1	90% H2O/10% D2O	0	5.0	ambient	303
21	2D 1H-15N T1rho	1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1	90% H2O/10% D2O	0	5.0	ambient	303
22	3D HNCO-IPAP	1 mM [U-100% 15N] L14e ribosomal protein-5, 5 % C12E5-6, 1.0 r hexanol-7	90% H2O/10% D2O	0	5.0	ambient	303

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	800
2	Varian	INOVA	500

NMR Refinement
Method	Details	Software
simulated annealing		VNMR

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	10
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	VNMR		Varian
2	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	peak picking	NMRView	aqua	Johnson, One Moon Scientific
4	chemical shift assignment	NMRView	aqua	Johnson, One Moon Scientific
5	chemical shift assignment	ARIA	1.2	Linge, O'Donoghue and Nilges
6	refinement	X-PLOR NIH	2.19	Schwieters, Kuszewski, Tjandra and Clore