2KDM

NMR structures of GA95 and GB95, two designed proteins with 95% sequence identity but different folds and functions


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.15-0.3 mM [U-100% 13C; U-100% 15N] Gb9590% H2O/10% D2O1007.2ambient293
23D HNCACB0.15-0.3 mM [U-100% 13C; U-100% 15N] Gb9590% H2O/10% D2O1007.2ambient293
33D CBCA(CO)NH0.15-0.3 mM [U-100% 13C; U-100% 15N] Gb9590% H2O/10% D2O1007.2ambient293
43D HBHA(CO)NH0.15-0.3 mM [U-100% 13C; U-100% 15N] Gb9590% H2O/10% D2O1007.2ambient293
53D H(CCO)NH0.15-0.3 mM [U-100% 13C; U-100% 15N] Gb9590% H2O/10% D2O1007.2ambient293
63D C(CO)NH0.15-0.3 mM [U-100% 13C; U-100% 15N] Gb9590% H2O/10% D2O1007.2ambient293
73D HNCO0.15-0.3 mM [U-100% 13C; U-100% 15N] Gb9590% H2O/10% D2O1007.2ambient293
83D 1H-15N NOESY0.15-0.3 mM [U-100% 13C; U-100% 15N] Gb9590% H2O/10% D2O1007.2ambient293
93D 1H-13C NOESY aliphatic0.15-0.3 mM [U-100% 13C; U-100% 15N] Gb9590% H2O/10% D2O1007.2ambient293
103D 1H-13C NOESY aromatic0.15-0.3 mM [U-100% 13C; U-100% 15N] Gb9590% H2O/10% D2O1007.2ambient293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
NMR Refinement
MethodDetailsSoftware
simulated annealingCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with acceptable covalent geometry
Conformers Calculated Total Number300
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read
2collectionXwinNMR2.5Bruker Biospin
3processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4data analysisSparky3Goddard
5refinementCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read