2KCK
NMR solution structure of the Northeast Structural Genomics Consortium (NESG) target MrR121A
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D CBCA(CO)NH | 1 mM [U-100% 13C; U-100% 15N] MrR121A-1 | 95% H2O/5% D2O | 200 | 6.5 | ambient | 298 | |
2 | 3D HNCACB | 1 mM [U-100% 13C; U-100% 15N] MrR121A-1 | 95% H2O/5% D2O | 200 | 6.5 | ambient | 298 | |
3 | 3D HNCO | 1 mM [U-100% 13C; U-100% 15N] MrR121A-1 | 95% H2O/5% D2O | 200 | 6.5 | ambient | 298 | |
4 | 3D 1H-15N NOESY | 1 mM [U-100% 13C; U-100% 15N] MrR121A-1 | 95% H2O/5% D2O | 200 | 6.5 | ambient | 298 | |
5 | 3D 1H-13C NOESY | 1 mM [U-100% 13C; U-100% 15N] MrR121A-1 | 95% H2O/5% D2O | 200 | 6.5 | ambient | 298 | |
6 | 2D 1H-15N HSQC | 1 mM [U-100% 13C; U-100% 15N] MrR121A-1 | 95% H2O/5% D2O | 200 | 6.5 | ambient | 298 | |
7 | 2D 1H-15N HSQC | 1 mM [U-100% 13C; U-100% 15N] MrR121A-1 | 95% H2O/5% D2O | |||||
8 | 2D 1H-15N HSQC | 1 mM [U-100% 13C; U-100% 15N] MrR121A-1 | 95% H2O/5% D2O | |||||
9 | 2D 1H-1H TOCSY | 1 mM [U-100% 13C; U-100% 15N] MrR121A-1 | 95% H2O/5% D2O | 200 | 6.5 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | First rounds of refinement with CYANA (ver 2), then XPLOR (ver 2.18) with RDC refinement | NMRView |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | chemical shift assignment | NMRView | Johnson, One Moon Scientific | |
2 | data analysis | NMRView | Johnson, One Moon Scientific | |
3 | collection | VnmrJ | Varian | |
4 | data analysis | CYANA | Guntert, Mumenthaler and Wuthrich | |
5 | refinement | X-PLOR | Brunger |