Solution NMR structure of the C-terminal EF-hand domain of human cardiac sodium channel NaV1.5
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 1.2 mM [U-100% 13C; U-100% 15N] entity | 100% H2O | 6.5 | ambient | 298 | ||
| 2 | 2D 1H-13C HSQC | 1.2 mM [U-100% 13C; U-100% 15N] entity | 100% H2O | 6.5 | ambient | 298 | ||
| 3 | 3D CBCA(CO)NH | 1.2 mM [U-100% 13C; U-100% 15N] entity | 100% H2O | 6.5 | ambient | 298 | ||
| 4 | 3D HNCO | 1.2 mM [U-100% 13C; U-100% 15N] entity | 100% H2O | 6.5 | ambient | 298 | ||
| 5 | 3D HNCACB | 1.2 mM [U-100% 13C; U-100% 15N] entity | 100% H2O | 6.5 | ambient | 298 | ||
| 6 | 3D HCCH-TOCSY | 1.2 mM [U-100% 13C; U-100% 15N] entity | 100% H2O | 6.5 | ambient | 298 | ||
| 7 | 3D HCCH-COSY | 1.2 mM [U-100% 13C; U-100% 15N] entity | 100% H2O | 6.5 | ambient | 298 | ||
| 8 | 3D 1H-15N NOESY | 1.2 mM [U-100% 13C; U-100% 15N] entity | 100% H2O | 6.5 | ambient | 298 | ||
| 9 | 3D 1H-13C NOESY | 1.2 mM [U-100% 13C; U-100% 15N] entity | 100% H2O | 6.5 | ambient | 298 | ||
| 10 | 2D 1H-1H NOESY | 1.2 mM entity | 100% H2O | 6.5 | ambient | 298 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AMX | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| molecular dynamics | TopSpin | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 50 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | TopSpin | 2.0 | Bruker Biospin |
| 2 | collection | TopSpin | 2.0 | Bruker Biospin |
| 3 | structure solution | CYANA | 2.1 | Guntert, P. et al. |
| 4 | refinement | Amber | 9 | Case, D. et al. |














