2KBG

Solution structure of the second Fibronectin type-III module of NCAM2


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.4mM [U-13C; U-15N] FnIII2 of NCAM2, 20mM sodium phosphate (pH 6.5), 0.02% sodium azide, 90% H2O, 10% D2O90% H2O/10% D2O6.5ambient298
22D 1H-13C HSQC1.4mM [U-13C; U-15N] FnIII2 of NCAM2, 20mM sodium phosphate (pH 6.5), 0.02% sodium azide, 90% H2O, 10% D2O90% H2O/10% D2O6.5ambient298
33D CBCA(CO)NH1.4mM [U-13C; U-15N] FnIII2 of NCAM2, 20mM sodium phosphate (pH 6.5), 0.02% sodium azide, 90% H2O, 10% D2O90% H2O/10% D2O6.5ambient298
43D HNCACB1.4mM [U-13C; U-15N] FnIII2 of NCAM2, 20mM sodium phosphate (pH 6.5), 0.02% sodium azide, 90% H2O, 10% D2O90% H2O/10% D2O6.5ambient298
53D HNCO1.4mM [U-13C; U-15N] FnIII2 of NCAM2, 20mM sodium phosphate (pH 6.5), 0.02% sodium azide, 90% H2O, 10% D2O90% H2O/10% D2O6.5ambient298
63D HCACO1.4mM [U-13C; U-15N] FnIII2 of NCAM2, 20mM sodium phosphate (pH 6.5), 0.02% sodium azide, 90% H2O, 10% D2O90% H2O/10% D2O6.5ambient298
73D HNCA1.4mM [U-13C; U-15N] FnIII2 of NCAM2, 20mM sodium phosphate (pH 6.5), 0.02% sodium azide, 90% H2O, 10% D2O90% H2O/10% D2O6.5ambient298
83D HN(CO)CA1.4mM [U-13C; U-15N] FnIII2 of NCAM2, 20mM sodium phosphate (pH 6.5), 0.02% sodium azide, 90% H2O, 10% D2O90% H2O/10% D2O6.5ambient298
93D H(CCO)NH1.4mM [U-13C; U-15N] FnIII2 of NCAM2, 20mM sodium phosphate (pH 6.5), 0.02% sodium azide, 90% H2O, 10% D2O90% H2O/10% D2O6.5ambient298
103D C(CO)NH1.4mM [U-13C; U-15N] FnIII2 of NCAM2, 20mM sodium phosphate (pH 6.5), 0.02% sodium azide, 90% H2O, 10% D2O90% H2O/10% D2O6.5ambient298
113D 1H-15N TOCSY1.4mM [U-13C; U-15N] FnIII2 of NCAM2, 20mM sodium phosphate (pH 6.5), 0.02% sodium azide, 90% H2O, 10% D2O90% H2O/10% D2O6.5ambient298
123D HCCH-TOCSY1.4mM [U-13C; U-15N] FnIII2 of NCAM2, 20mM sodium phosphate (pH 6.5), 0.02% sodium azide, 90% H2O, 10% D2O90% H2O/10% D2O6.5ambient298
133D 1H-15N NOESY1.4mM [U-13C; U-15N] FnIII2 of NCAM2, 20mM sodium phosphate (pH 6.5), 0.02% sodium azide, 90% H2O, 10% D2O90% H2O/10% D2O6.5ambient298
143D 1H-13C NOESY1.4mM [U-13C; U-15N] FnIII2 of NCAM2, 20mM sodium phosphate (pH 6.5), 0.02% sodium azide, 100% D2O100% D2O6.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA750
2VarianINOVA800
NMR Refinement
MethodDetailsSoftware
simulated annealingX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionX-PLOR NIH2.19Schwieters, Kuszewski, Tjandra, Clore
2refinementX-PLOR NIH2.19Schwieters, Kuszewski, Tjandra, Clore
3autoassign backboneAutoAssign2.3.0Zimmerman, Moseley, Kulikowski, Montelione
4noe assignmentCYANA2.1Guntert, Mumenthaler, Wuthrich
5processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer, Bax
6predicting torsion anglesTALOSCornilescu, Delaglio, Bax
7collectionVNMRVarian