Association of subunit d (Vma6p) and E (Vma4p) with G (Vma10p) and the NMR solution structure of subunit G (G1-59) of the Saccharomyces cerevisiae V1VO ATPase
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 25 mM sodium phosphate | 90% H2O/10% D2O | 0 | 6.8 | AMBIENT | 288 | |
| 2 | 2D 1H-13C HSQC | 25 mM sodium phosphate | 90% H2O/10% D2O | 0 | 6.8 | AMBIENT | 288 | |
| 3 | 3D CBCA(CO)NH | 25 mM sodium phosphate | 90% H2O/10% D2O | 0 | 6.8 | AMBIENT | 288 | |
| 4 | 3D HNCACB | 25 mM sodium phosphate | 90% H2O/10% D2O | 0 | 6.8 | AMBIENT | 288 | |
| 5 | 3D HNCO | 25 mM sodium phosphate | 90% H2O/10% D2O | 0 | 6.8 | AMBIENT | 288 | |
| 6 | 3D H(CCO)NH | 25 mM sodium phosphate | 90% H2O/10% D2O | 0 | 6.8 | AMBIENT | 288 | |
| 7 | 3D C(CO)NH | 25 mM sodium phosphate | 90% H2O/10% D2O | 0 | 6.8 | AMBIENT | 288 | |
| 8 | 3D 1H-15N NOESY | 25 mM sodium phosphate | 90% H2O/10% D2O | 0 | 6.8 | AMBIENT | 288 | |
| 9 | 3D 1H-13C NOESY | 25 mM sodium phosphate | 90% H2O/10% D2O | 0 | 6.8 | AMBIENT | 288 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics | CYANA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 10 |
| Conformers Submitted Total Number | 10 |
| Representative Model | 1 (closest to the average) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | CYANA | 3.0 | GUNTERT, P. ET AL. |
| 2 | collection | TopSpin | Bruker Biospin | |
| 3 | data analysis | Sparky | Goddard, T. et al. | |
| 4 | data analysis | MOLMOL | Koradi, R. et al. | |














