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Human ARNT C-Terminal PAS Domain, 3 Residue IB slip
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 900 uM [U-98% 13C; U-98% 15N] ARNT PAS-B Slipped IB Strand, 50 mM TRIS, 17 mM sodium chloride, 5 mM DTT 90% H2O/10% D2O 17 7.5 ambient 298 2 2D 1H-13C HSQC 900 uM [U-98% 13C; U-98% 15N] ARNT PAS-B Slipped IB Strand, 50 mM TRIS, 17 mM sodium chloride, 5 mM DTT 90% H2O/10% D2O 17 7.5 ambient 298 3 3D HNCACB 900 uM [U-98% 13C; U-98% 15N] ARNT PAS-B Slipped IB Strand, 50 mM TRIS, 17 mM sodium chloride, 5 mM DTT 90% H2O/10% D2O 17 7.5 ambient 298 4 3D CBCA(CO)NH 900 uM [U-98% 13C; U-98% 15N] ARNT PAS-B Slipped IB Strand, 50 mM TRIS, 17 mM sodium chloride, 5 mM DTT 90% H2O/10% D2O 17 7.5 ambient 298 5 3D HNCO 900 uM [U-98% 13C; U-98% 15N] ARNT PAS-B Slipped IB Strand, 50 mM TRIS, 17 mM sodium chloride, 5 mM DTT 90% H2O/10% D2O 17 7.5 ambient 298 6 2D 1H-1H TOCSY 900 uM [U-98% 13C; U-98% 15N] ARNT PAS-B Slipped IB Strand, 50 mM TRIS, 17 mM sodium chloride, 5 mM DTT 90% H2O/10% D2O 17 7.5 ambient 298 7 2D 1H-1H NOESY 900 uM [U-98% 13C; U-98% 15N] ARNT PAS-B Slipped IB Strand, 50 mM TRIS, 17 mM sodium chloride, 5 mM DTT 90% H2O/10% D2O 17 7.5 ambient 298 8 3D 1H-13C NOESY 900 uM [U-98% 13C; U-98% 15N] ARNT PAS-B Slipped IB Strand, 50 mM TRIS, 17 mM sodium chloride, 5 mM DTT 90% H2O/10% D2O 17 7.5 ambient 298 9 3D 1H-15N NOESY 900 uM [U-98% 13C; U-98% 15N] ARNT PAS-B Slipped IB Strand, 50 mM TRIS, 17 mM sodium chloride, 5 mM DTT 90% H2O/10% D2O 17 7.5 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 800
NMR Refinement Method Details Software simulated annealing, torsion angle dynamics, molecular dynamics NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 1000 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe 2.3 Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 peak picking NMRView 5.2.2 Johnson, One Moon Scientific 3 data analysis NMRView 5.2.2 Johnson, One Moon Scientific 4 chemical shift assignment NMRView 5.2.2 Johnson, One Moon Scientific 5 chemical shift assignment ARIA 2.1 Linge, O'Donoghue and Nilges 6 structure solution ARIA 2.1 Linge, O'Donoghue and Nilges 7 structure solution CNS 1.2 Brunger, Adams, Clore, Gros, Nilges and Read 8 refinement CNS 1.2 Brunger, Adams, Clore, Gros, Nilges and Read